RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ADAMTS18Q8TE60 1221 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 PATE1Q8WXA2 126 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 RLN3Q8WXF3 142 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 ISOC1Q96CN7 298 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 TCTN2Q96GX1 697 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 CHRNA10Q9GZZ6 450 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 FANCEQ9HB96 536 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 KLHL28Q9NXS3 571 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 SLC13A4Q9UKG4 626 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 FBXL21Q9UKT6 434 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 PCDHGA6Q9Y5G7 932 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 DSPPQ9NZW4 1301 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 ENO4A6NNW6 628 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 PTGES3LE9PB15 166 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 J3KTA2 159 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 PCDH17O14917 1159 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 UBXN7O94888 489 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 GPR75O95800 540 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 AK1P00568 194 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 ATP1B1P05026 303 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 ALPPP05187 535 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 AGXTP21549 392 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 CDH3P22223 829 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 PRKAR1BP31321 381 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 SLC5A2P31639 672 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 LSSP48449 732 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 RAB38P57729 211 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 CDC42P60953 191 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 HNRNPKP61978 463 aaKnown RBP eCLIP13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 SLC35A2P78381 396 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 C1orf61Q13536 156 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 NPTX1Q15818 432 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 CCDC85BQ15834 202 aaPredicted RBP13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 NEDD8Q15843 81 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 ZNF750Q32MQ0 723 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 COL13A1Q5TAT6 717 aaPredicted RBP13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 XAF1Q6GPH4 301 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 C16orf62Q7Z3J2 963 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 ARL14Q8N4G2 192 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 C19orf47Q8N9M1 422 aaKnown RBP13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 RHOXF1Q8NHV9 184 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 CNIH3Q8TBE1 160 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 ZNF675Q8TD23 568 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 MYDGFQ969H8 173 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 GIMAP5Q96F15 307 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 SPACA7Q96KW9 195 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 FNDC11Q9BVV2 318 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 DGCR6LQ9BY27 220 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 TPSD1Q9BZJ3 242 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 ANKRD19PQ9H560 264 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 MTHFD2LQ9H903 347 aaPredicted RBP13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 IL21RQ9HBE5 538 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 ANKHQ9HCJ1 492 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 TIMMDC1Q9NPL8 285 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 EVA1BQ9NVM1 165 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 EPHA6Q9UF33 1036 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 ZNF232Q9UNY5 417 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 C19orf53Q9UNZ5 99 aaPredicted RBP13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 NINQ8N4C6 2090 aa13.87□□□□□ -0.19
ECHDC1-220ENST00000528402 SCN3AQ9NY46 2000 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 SH3D21A4FU49 640 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 TRIM64BA6NI03 449 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 B4DGG1 531 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 CYR61O00622 381 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 FFAR1O14842 300 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 B4GAT1O43505 415 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 RGS10O43665 173 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 PLOD3O60568 738 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 FAM20BO75063 409 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 UGT2B17O75795 530 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 EIF2S1P05198 315 aaKnown RBP13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 CHRM4P08173 479 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 CELA2BP08218 269 aaPredicted RBP13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 IFNGR2P38484 337 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 CRISP1P54107 249 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 ALDH6A1Q02252 535 aaKnown RBP13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 DUSP2Q05923 314 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 ILKQ13418 452 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 GARNL3Q5VVW2 1013 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 CWF19L1Q69YN2 538 aaKnown RBP13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 ZNF770Q6IQ21 691 aaPredicted RBP13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 MFSD12Q6NUT3 480 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 OGFOD3Q6PK18 319 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 CD300LDQ6UXZ3 194 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 PRSS48Q7RTY5 328 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 C17orf82Q86X59 251 aaPredicted RBP13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 ENTHD1Q8IYW4 607 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 CARFQ8N187 725 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 AQP11Q8NBQ7 271 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 ZNF540Q8NDQ6 660 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 C7orf57Q8NEG2 295 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 TOR1AIP2Q8NFQ8 470 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 RAB2BQ8WUD1 216 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 FCGR1BQ92637 280 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 MUL1Q969V5 352 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 C16orf58Q96GQ5 468 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 PRRC1Q96M27 445 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 IER2Q9BTL4 223 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 UCK2Q9BZX2 261 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms