RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 NEFHP12036 1026 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 DRD5P21918 477 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 MPIP34949 423 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 PTGER1P34995 402 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 PTGS2P35354 604 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 DNASE1L1P49184 302 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 RPP38P78345 283 aaKnown RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 DUSP2Q05923 314 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 ZNF844Q08AG5 666 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 KRT71Q3SY84 523 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 TRMT12Q53H54 448 aaKnown RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 ZNF628Q5EBL2 1059 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 ARL13AQ5H913 290 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 KANK2Q63ZY3 851 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 CLEC6AQ6EIG7 209 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 FAM71E1Q6IPT2 247 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 NOXRED1Q6NXP6 359 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 ARHGAP11AQ6P4F7 1023 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 RPTNQ6XPR3 784 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 Q6ZSR9 355 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 IKBIPQ70UQ0 350 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 FGD2Q7Z6J4 655 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 FAM109AQ8N4B1 249 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 FAM13CQ8NE31 585 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 ADCY4Q8NFM4 1077 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 FAM57AQ8TBR7 257 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 EXOSC8Q96B26 276 aaKnown RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 HSPBAP1Q96EW2 488 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 CCDC120Q96HB5 630 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 LCORQ96JN0 433 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 EBPLQ9BY08 206 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 STMN4Q9H169 189 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 SSU72Q9NP77 194 aaKnown RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 PFDN4Q9NQP4 134 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 C1orf109Q9NX04 203 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 TUBA8Q9NY65 449 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 BCAP29Q9UHQ4 241 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 CNOT11Q9UKZ1 510 aaKnown RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 ENTPD4Q9Y227 616 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 TRAF6Q9Y4K3 522 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 DNAJC15Q9Y5T4 150 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 DOPEY1Q5JWR5 2465 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 COL12A1Q99715 3063 aa11.15□□□□□ -0.63
TRAPPC4-209ENST00000528230 SETXQ7Z333 2677 aaKnown RBP11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 FREM3P0C091 2139 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 A0A0G2JMM0 328 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 A0A1B0GVC2 190 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 A0A1W2PPB8 328 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 A0A1W2PRS3 328 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 A1L4Q6 167 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 OR14I1A6ND48 311 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 KIR3DP1A8MWS1 328 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 MYO1GB0I1T2 1018 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 E9PLN8 166 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 G3V3Y1 287 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 ACOX3O15254 700 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 CTIFO43310 598 aaKnown RBP11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 PLOD3O60568 738 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 SLITRK5O94991 958 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 CBX7O95931 251 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 IGHG3P01860 377 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 BPGMP07738 259 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 CREB1P16220 341 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 AGAP20933 346 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 PIGAP37287 484 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 ETV4P43268 484 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 PPICP45877 212 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 EMDP50402 254 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 PSPHP78330 225 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 HSF1Q00613 529 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 DUSP8Q13202 625 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 ART3Q13508 389 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 SLC10A1Q14973 349 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 EXOSC7Q15024 291 aaKnown RBP11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 RPS6KA2Q15349 733 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 UGT3A2Q3SY77 523 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 FAM180BQ6P0A1 224 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 TMEM81Q6P7N7 255 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 XKRXQ6PP77 449 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 NUP54Q7Z3B4 507 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 DOLPP1Q86YN1 238 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 ZNF808Q8N4W9 903 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 TMEM251Q8N6I4 163 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 OR10G3Q8NGC4 313 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 OR52R1Q8NGF1 315 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 OR6Y1Q8NGX8 325 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 SPPL2AQ8TCT8 520 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 PHF10Q8WUB8 498 aaKnown RBP11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 ITLN2Q8WWU7 325 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 FCRL1Q96LA6 429 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 VKORC1Q9BQB6 163 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 MECRQ9BV79 373 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 NXF5Q9H1B4 397 aaKnown RBP11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 DEFB127Q9H1M4 99 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 TUBB1Q9H4B7 451 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 LRTM1Q9HBL6 345 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 PROK2Q9HC23 129 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 ZFP64Q9NPA5 681 aa11.14□□□□□ -0.63
TRAPPC4-209ENST00000528230 MIEF1Q9NQG6 463 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms