RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 PTGDR2Q9Y5Y4 395 aa11.19□□□□□ -0.62
SDHD-205ENST00000528048 ANKRD12Q6UB98 2062 aa11.19□□□□□ -0.62
SDHD-205ENST00000528048 SCN3AQ9NY46 2000 aa11.19□□□□□ -0.62
SDHD-205ENST00000528048 BOD1L1Q8NFC6 3051 aa11.19□□□□□ -0.62
SDHD-205ENST00000528048 TRGV8A0A0C4DH27 118 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 TMEM233B4DJY2 109 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 G3V3Y1 287 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 LRRTM2O43300 516 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 AKAP10O43572 662 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 PEX11AO75192 247 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 FBXO45P0C2W1 286 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 PCSK2P16519 638 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 S1PR1P21453 382 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 RFC3P40938 356 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 SLC1A6P48664 564 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 TDGF1P3P51864 188 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 MAGOHP61326 146 aaKnown RBP11.18□□□□□ -0.62
SDHD-205ENST00000528048 MGAT2Q10469 447 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 CASP8Q14790 479 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 EXOSC7Q15024 291 aaKnown RBP11.18□□□□□ -0.62
SDHD-205ENST00000528048 KIAA0040Q15053 153 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 ZNF791Q3KP31 576 aaPredicted RBP11.18□□□□□ -0.62
SDHD-205ENST00000528048 UGT3A2Q3SY77 523 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 RFTN2Q52LD8 501 aaPredicted RBP11.18□□□□□ -0.62
SDHD-205ENST00000528048 TRMT12Q53H54 448 aaKnown RBP11.18□□□□□ -0.62
SDHD-205ENST00000528048 SLC22A16Q86VW1 577 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 GOLGA6L1Q8N7Z2 621 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 C17orf47Q8NEP4 570 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 OR5M3Q8NGP4 307 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 OR9A2Q8NGT5 310 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 C16orf52Q8NHV5 167 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 ZNF675Q8TD23 568 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 SSC4DQ8WTU2 575 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 KAT2AQ92830 837 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 GFM2Q969S9 779 aaKnown RBP11.18□□□□□ -0.62
SDHD-205ENST00000528048 TUBGCP3Q96CW5 907 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 HSPBAP1Q96EW2 488 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 LCORQ96JN0 433 aaPredicted RBP11.18□□□□□ -0.62
SDHD-205ENST00000528048 TSPAN10Q9H1Z9 355 aaPredicted RBP11.18□□□□□ -0.62
SDHD-205ENST00000528048 TUBB1Q9H4B7 451 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 REEP4Q9H6H4 257 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 TAS2R7Q9NYW3 318 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 SH3BP4Q9P0V3 963 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 EIF3LQ9Y262 564 aaKnown RBP11.18□□□□□ -0.62
SDHD-205ENST00000528048 RAP2CQ9Y3L5 183 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 NPFFR2Q9Y5X5 522 aa11.18□□□□□ -0.62
SDHD-205ENST00000528048 TMEM120BA0PK00 339 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 CLEC18AA5D8T8 446 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 MYO1GB0I1T2 1018 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 LSM1O15116 133 aaKnown RBP11.17□□□□□ -0.62
SDHD-205ENST00000528048 ACOX3O15254 700 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 HS6ST1O60243 411 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 CDC40O60508 579 aaKnown RBP eCLIP11.17□□□□□ -0.62
SDHD-205ENST00000528048 ZNF354AO60765 605 aaPredicted RBP11.17□□□□□ -0.62
SDHD-205ENST00000528048 SEMA7AO75326 666 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 SKAP2O75563 359 aaPredicted RBP11.17□□□□□ -0.62
SDHD-205ENST00000528048 SLITRK5O94991 958 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 CLPSP04118 112 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 JUNP05412 331 aaKnown RBP11.17□□□□□ -0.62
SDHD-205ENST00000528048 PRPS2P11908 318 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 ABOP16442 354 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 NAGAP17050 411 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 BGNP21810 368 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 DRD5P21918 477 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 PTGER1P34995 402 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 KRT20P35900 424 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 RPL3P39023 403 aaKnown RBP11.17□□□□□ -0.62
SDHD-205ENST00000528048 PPICP45877 212 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 RPL14P50914 215 aaKnown RBP11.17□□□□□ -0.62
SDHD-205ENST00000528048 KCNJ2P63252 427 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 MRPS35P82673 323 aaKnown RBP11.17□□□□□ -0.62
SDHD-205ENST00000528048 MAD2L1Q13257 205 aaPredicted RBP11.17□□□□□ -0.62
SDHD-205ENST00000528048 LTB4RQ15722 352 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 C4orf17Q53FE4 359 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 ZNF628Q5EBL2 1059 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 TBCELQ5QJ74 424 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 TMEM198Q66K66 360 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 ATG16L1Q676U5 607 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 CLEC18BQ6UXF7 455 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 TRIM42Q8IWZ5 723 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 ZNF441Q8N8Z8 693 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 FNDC5Q8NAU1 212 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 ZFP62Q8NB50 900 aaPredicted RBP11.17□□□□□ -0.62
SDHD-205ENST00000528048 CLEC18CQ8NCF0 446 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 OR6Y1Q8NGX8 325 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 OR2T11Q8NH01 316 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 ZFP28Q8NHY6 868 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.17□□□□□ -0.62
SDHD-205ENST00000528048 MGARPQ8TDB4 240 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 PAQR8Q8TEZ7 354 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 DIO2Q92813 273 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 ADIPOR1Q96A54 375 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 PPCDCQ96CD2 204 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 CTHRC1Q96CG8 243 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 TSSK3Q96PN8 268 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 PRPF18Q99633 342 aaKnown RBP11.17□□□□□ -0.62
SDHD-205ENST00000528048 TMBIM4Q9HC24 238 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 TAS2R9Q9NYW1 312 aa11.17□□□□□ -0.62
SDHD-205ENST00000528048 SUCOQ9UBS9 1254 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms