RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 AMER2Q8N7J2 671 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 MFSD9Q8NBP5 474 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 MINDY2Q8NBR6 621 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 CLEC2DQ9UHP7 191 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 SZT2Q5T011 3432 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 EML2O95834 649 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 F3P13726 295 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 MAGEA8P43361 318 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 SNRPNP63162 240 aaKnown RBP16.55■□□□□ 0.24
USH1C-205ENST00000527020 ALDH6A1Q02252 535 aaKnown RBP16.55■□□□□ 0.24
USH1C-205ENST00000527020 INAVAQ3KP66 663 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 CD300LDQ6UXZ3 194 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 CYP4Z2PQ8N1L4 340 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 TCEANCQ8N8B7 351 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 C6orf62Q9GZU0 229 aaPredicted RBP16.55■□□□□ 0.24
USH1C-205ENST00000527020 QRSL1Q9H0R6 528 aaKnown RBP16.55■□□□□ 0.24
USH1C-205ENST00000527020 ANKRA2Q9H9E1 313 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 POLE4Q9NR33 117 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 QPCTLQ9NXS2 382 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 EPOPA6NHQ4 379 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 CCRL2O00421 344 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 TNNI3P19429 210 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 ARFIP1P53367 373 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 PPP2CBP62714 309 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 PPP2CAP67775 309 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 ZNF91Q05481 1191 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 TMEM196Q5HYL7 178 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 MFSD4BQ5TF39 518 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 MEDAGQ5VYS4 303 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 OR4K5Q8NGD3 323 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 OR8J1Q8NGP2 316 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 ELSPBP1Q96BH3 223 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 ZNF681Q96N22 645 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 FNDC11Q9BVV2 318 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 KIR3DX1Q9H7L2 352 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 HHATLQ9HCP6 504 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 SLC9A8Q9Y2E8 581 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 TAF4O00268 1085 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 SLC31A1O15431 190 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 PROM1O43490 865 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 NARSO43776 548 aaKnown RBP16.54■□□□□ 0.24
USH1C-205ENST00000527020 KIAA0513O60268 411 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 GPX5O75715 221 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 UPK1BO75841 260 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 FHP07954 510 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 CKMT1AP12532 417 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 CSTF2P33240 577 aaKnown RBP eCLIP16.54■□□□□ 0.24
USH1C-205ENST00000527020 RPS3AP61247 264 aaKnown RBP16.54■□□□□ 0.24
USH1C-205ENST00000527020 RHAGQ02094 409 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 CEBPEQ15744 281 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 CASP12Q6UXS9 341 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 CLIP4Q8N3C7 705 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 KLHL6Q8WZ60 621 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 FGF11Q92914 225 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 PRRC1Q96M27 445 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 TRMT61BQ9BVS5 477 aaKnown RBP16.54■□□□□ 0.24
USH1C-205ENST00000527020 POLMQ9NP87 494 aaPredicted RBP16.54■□□□□ 0.24
USH1C-205ENST00000527020 CTPS2Q9NRF8 586 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 GIN1Q9NXP7 522 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D29Q9UFV1 150 aa16.54■□□□□ 0.24
USH1C-205ENST00000527020 MYO9BQ13459 2157 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 A0A0G2JPF8 293 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 HNRNPCL2B2RXH8 293 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 HNRNPCL3B7ZW38 293 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 PRKYO43930 277 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 CSO75390 466 aaKnown RBP16.53■□□□□ 0.24
USH1C-205ENST00000527020 HNRNPCL4P0DMR1 293 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 TNFRSF4P43489 277 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 COL9A2Q14055 689 aaPredicted RBP16.53■□□□□ 0.24
USH1C-205ENST00000527020 OCLNQ16625 522 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 TPRG1LQ5T0D9 272 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 C1orf94Q6P1W5 598 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 DGLUCYQ7Z3D6 616 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 IQCHQ86VS3 1027 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 SLC22A16Q86VW1 577 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 OR56A1Q8NGH5 318 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 TMEM80Q96HE8 168 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 OR7D2Q96RA2 312 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 SPATA5L1Q9BVQ7 753 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 PRR14Q9BWN1 585 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 TSSK6Q9BXA6 273 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 PBX4Q9BYU1 374 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 ENTPD4Q9Y227 616 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 PRSS38A1L453 326 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 POM121BA6NF01 834 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 ADAM23O75077 832 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 GUCY1B2O75343 617 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 SCG5P05408 212 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 CHRM5P08912 532 aaPredicted RBP16.53■□□□□ 0.24
USH1C-205ENST00000527020 CSNK2A2P19784 350 aaPredicted RBP16.53■□□□□ 0.24
USH1C-205ENST00000527020 COL9A1P20849 921 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 CMPK1P30085 196 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 BUD31P41223 144 aaPredicted RBP16.53■□□□□ 0.24
USH1C-205ENST00000527020 MC3RP41968 323 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 CD300CQ08708 224 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 COX10Q12887 443 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 NCF4Q15080 339 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 TCEA2Q15560 299 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 GPAT3Q53EU6 434 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 ACSM5Q6NUN0 579 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms