RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 CAPN14A8MX76 684 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 K7ENP7 123 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 LOC400499M0QZD8 3231 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 UPK1AO00322 258 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 FBP2O00757 339 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 SLC22A2O15244 555 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 EMC8O43402 210 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 IGKV3-11P04433 115 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 ITGA3P26006 1051 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 ADSLP30566 484 aaPredicted RBP12.75□□□□□ -0.37
CD44-224ENST00000526669 CPA2P48052 419 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 CCT3P49368 545 aaKnown RBP12.75□□□□□ -0.37
CD44-224ENST00000526669 CLCN2P51788 898 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 CASP9P55211 416 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 VAC14Q08AM6 782 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 FUT7Q11130 342 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 ZNF155Q12901 538 aaPredicted RBP12.75□□□□□ -0.37
CD44-224ENST00000526669 TP53BP2Q13625 1128 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 EXT1Q16394 746 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 CRTC2Q53ET0 693 aaPredicted RBP12.75□□□□□ -0.37
CD44-224ENST00000526669 FCRLBQ6BAA4 426 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 PLAG1Q6DJT9 500 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 INO80CQ6PI98 192 aaPredicted RBP12.75□□□□□ -0.37
CD44-224ENST00000526669 ZNF621Q6ZSS3 439 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 MSANTD1Q6ZTZ1 278 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 C9orf40Q8IXQ3 194 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 SIRT6Q8N6T7 355 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 M1APQ8TC57 530 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 NACC2Q96BF6 587 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 CTHRC1Q96CG8 243 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 RCN3Q96D15 328 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 OTUB1Q96FW1 271 aaPredicted RBP12.75□□□□□ -0.37
CD44-224ENST00000526669 FER1L6-AS2Q96M78 137 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 GAL3ST4Q96RP7 486 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 YIPF4Q9BSR8 244 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 SLC25A23Q9BV35 468 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 PAIP1Q9H074 479 aaKnown RBP12.75□□□□□ -0.37
CD44-224ENST00000526669 C3orf14Q9HBI5 128 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 NEUROD4Q9HD90 331 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 ATP13A2Q9NQ11 1180 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 ZCCHC3Q9NUD5 404 aaKnown RBP12.75□□□□□ -0.37
CD44-224ENST00000526669 MRGBPQ9NV56 204 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 TMEM45AQ9NWC5 275 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 SLAMF8Q9P0V8 285 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 ZNF639Q9UID6 485 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 NDUFAF1Q9Y375 327 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 CFAP47Q6ZTR5 3102 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 A8MUI8 341 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 PLOD2O00469 737 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 MRASO14807 208 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 PLOD3O60568 738 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 PRAMEF2O60811 474 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 CHI3L1P36222 383 aaPredicted RBP12.74□□□□□ -0.37
CD44-224ENST00000526669 CCL11P51671 97 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 RRADP55042 308 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 UCNP55089 124 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 SLC37A1P57057 533 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 AIMP2Q13155 320 aaKnown RBP12.74□□□□□ -0.37
CD44-224ENST00000526669 NFYCQ13952 458 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 NNATQ16517 81 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 ANGPTL8Q6UXH0 198 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 C16orf47Q6ZP98 133 aaPredicted RBP12.74□□□□□ -0.37
CD44-224ENST00000526669 DHDDSQ86SQ9 333 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 KBTBD2Q8IY47 623 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 ZNF615Q8N8J6 731 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 TMEM102Q8N9M5 508 aaPredicted RBP12.74□□□□□ -0.37
CD44-224ENST00000526669 CLEC1AQ8NC01 280 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 C16orf52Q8NHV5 167 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 PSMA8Q8TAA3 256 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 PNPT1Q8TCS8 783 aaKnown RBP12.74□□□□□ -0.37
CD44-224ENST00000526669 SFXN5Q8TD22 340 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 BRIX1Q8TDN6 353 aaKnown RBP12.74□□□□□ -0.37
CD44-224ENST00000526669 ELP5Q8TE02 316 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 AURKBQ96GD4 344 aaPredicted RBP12.74□□□□□ -0.37
CD44-224ENST00000526669 SLC35G5Q96KT7 338 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 SLC35A5Q9BS91 424 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 ITPAQ9BY32 194 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 DEFB126Q9BYW3 111 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 SEMA4CQ9C0C4 833 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 ING2Q9H160 280 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 FOLH1BQ9HBA9 442 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 MMP25Q9NPA2 562 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 PTGFRNQ9P2B2 879 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 VPS4AQ9UN37 437 aa12.74□□□□□ -0.37
CD44-224ENST00000526669 C19orf53Q9UNZ5 99 aaPredicted RBP12.74□□□□□ -0.37
CD44-224ENST00000526669 HEMK1Q9Y5R4 338 aaPredicted RBP12.74□□□□□ -0.37
CD44-224ENST00000526669 A0A087WV62 115 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 A0A096LPI6 279 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 DYTNA2CJ06 578 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 AIM2O14862 343 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 SLITRK5O94991 958 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 KCNH1O95259 989 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 CBX6O95503 412 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 SERPINA7P05543 415 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 UQCRC2P22695 453 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 EMDP50402 254 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 RPS26P62854 115 aaKnown RBP12.73□□□□□ -0.37
CD44-224ENST00000526669 RNF4P78317 190 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 PRR5P85299 388 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 FOXK2Q01167 660 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms