RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 FAM83EQ2M2I3 478 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 NHSL2Q5HYW2 709 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 CDKL4Q5MAI5 379 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 WIPI1Q5MNZ9 446 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 FNDC7Q5VTL7 733 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 TMEM64Q6YI46 380 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 LCA5Q86VQ0 697 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 DND1Q8IYX4 353 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 KRT78Q8N1N4 520 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 SPATA6LQ8N4H0 392 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 RHEBL1Q8TAI7 183 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 KCTD4Q8WVF5 259 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 ABTB1Q969K4 478 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 NXNL1Q96CM4 212 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 PIK3IP1Q96FE7 263 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 FBXL20Q96IG2 436 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 RILPQ96NA2 401 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 GNRHR2Q96P88 292 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 F2RL3Q96RI0 385 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 SFXN3Q9BWM7 321 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 LYRM4Q9HD34 91 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 NDRG3Q9UGV2 375 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 TBK1Q9UHD2 729 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 C15orf41Q9Y2V0 281 aa11.39□□□□□ -0.59
CCDC90B-205ENST00000525916 RTCAO00442 366 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 FPR1P21462 350 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 KCNC1P48547 511 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 MASP1P48740 699 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 PTH2RP49190 550 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 NAGLUP54802 743 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 FBXW4P57775 412 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 HERVK_113P63132 956 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 ERVK-8P63133 956 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 IGLV3-21P80748 117 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 ZNF844Q08AG5 666 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 IFFO1Q0D2I5 559 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 ACAP2Q15057 778 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 OR4D1Q15615 310 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 TBCELQ5QJ74 424 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 HMBOX1Q6NT76 420 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 SLC29A4Q7RTT9 530 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 UBE3DQ7Z6J8 389 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 GCNT2Q8N0V5 402 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 PLD6Q8N2A8 252 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 STAG3L4Q8TBR4 150 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 INTS12Q96CB8 462 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 KCNC2Q96PR1 638 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 ATOH8Q96SQ7 321 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 TUBA1CQ9BQE3 449 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 PIGQQ9BRB3 760 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 ERVK-6Q9BXR3 956 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 WWTR1Q9GZV5 400 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 VPS11Q9H270 941 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 NT5DC2Q9H857 520 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 KLHL28Q9NXS3 571 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 ERVK-19Q9WJR5 959 aa11.38□□□□□ -0.59
CCDC90B-205ENST00000525916 PRR14LQ5THK1 2151 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 A0A1W2PPM1 405 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 ANKRD33BA6NCL7 494 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 SMIM23A6NLE4 172 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 SNPHO15079 494 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 PRAMEF4O60810 478 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 KERAO60938 352 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 CYP4B1P13584 511 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 CPN2P22792 545 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 ATP5A1P25705 553 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 HPDP32754 393 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 SLC6A12P48065 614 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 HNMTP50135 292 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 PLIN5Q00G26 463 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 TGM3Q08188 693 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 EBPQ15125 230 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 RPS6KA2Q15349 733 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 TGFBIQ15582 683 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 TSNAXIP1Q2TAA8 658 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 TECRLQ5HYJ1 363 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 PRAMEF9Q5VWM5 478 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 LRIG3Q6UXM1 1119 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 RNF111Q6ZNA4 994 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 YRDCQ86U90 279 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 GPSM1Q86YR5 675 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 ZNF441Q8N8Z8 693 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 ACOT4Q8N9L9 421 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 FAM83FQ8NEG4 500 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 ZPLD1Q8TCW7 415 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 NTNG2Q96CW9 530 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 ART5Q96L15 291 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 WFIKKN1Q96NZ8 548 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 ZIM3Q96PE6 472 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 HS3ST6Q96QI5 342 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 GSX2Q9BZM3 304 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 ALG9Q9H6U8 611 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 TEX10Q9NXF1 929 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 ZNF490Q9ULM2 529 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 WIF1Q9Y5W5 379 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 SPACA6W5XKT8 324 aa11.37□□□□□ -0.59
CCDC90B-205ENST00000525916 TLDC2A0PJX2 215 aa11.36□□□□□ -0.59
CCDC90B-205ENST00000525916 A8MXE2 369 aa11.36□□□□□ -0.59
CCDC90B-205ENST00000525916 TP53I11O14683 189 aa11.36□□□□□ -0.59
CCDC90B-205ENST00000525916 GNB5O14775 395 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms