RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PRR22Q8IZ63 422 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 LRRC25Q8N386 305 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-203ENST00000525013 ADIPOR1Q96A54 375 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 CNRIP1Q96F85 164 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-203ENST00000525013 APIPQ96GX9 242 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 PROK2Q9HC23 129 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 PNPLA3Q9NST1 481 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 MAT2BQ9NZL9 334 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 UTS2RQ9UKP6 389 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 CNOT11Q9UKZ1 510 aaKnown RBP17.06■□□□□ 0.32
CAPN1-203ENST00000525013 CFL2Q9Y281 166 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 DCHS2Q6V1P9 2916 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 TRGV5A0A0B4J1U4 118 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 UBFD1O14562 309 aaKnown RBP17.05■□□□□ 0.32
CAPN1-203ENST00000525013 COPEO14579 308 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 BCKDKO14874 412 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 SUSD5O60279 629 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 PLIN3O60664 434 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 RFPL3SP0C7P2 107 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 DRD2P14416 443 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 GPX3P22352 226 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 CRHR1P34998 444 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 RAE1P78406 368 aaKnown RBP17.05■□□□□ 0.32
CAPN1-203ENST00000525013 DUSP2Q05923 314 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 MGAT2Q10469 447 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 PMPCAQ10713 525 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 NNATQ16517 81 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 SRRM1Q8IYB3 904 aaKnown RBP17.05■□□□□ 0.32
CAPN1-203ENST00000525013 RPRMLQ8N4K4 120 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 MARVELD2Q8N4S9 558 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 EXOSC8Q96B26 276 aaKnown RBP17.05■□□□□ 0.32
CAPN1-203ENST00000525013 EBPLQ9BY08 206 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 NXF5Q9H1B4 397 aaKnown RBP17.05■□□□□ 0.32
CAPN1-203ENST00000525013 C12orf65Q9H3J6 166 aaKnown RBP17.05■□□□□ 0.32
CAPN1-203ENST00000525013 B4GALT7Q9UBV7 327 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 DTX4Q9Y2E6 619 aa17.05■□□□□ 0.32
CAPN1-203ENST00000525013 ADGRG4Q8IZF6 3080 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 A0A1B0GVC2 190 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 TLDC2A0PJX2 215 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 LRRC3CA6NJW4 275 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 FIGNL2A6NMB9 653 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 C19orf84I3L1E1 186 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 AQP7O14520 342 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 CDH16O75309 829 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 CPA3P15088 417 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 KRT4P19013 534 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 ACVR2AP27037 513 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 TIA1P31483 386 aaKnown RBP eCLIP17.04■□□□□ 0.32
CAPN1-203ENST00000525013 FOXA1P55317 472 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 NAA20P61599 178 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 LTB4RQ15722 352 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 IMPG1Q17R60 797 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 TRMT12Q53H54 448 aaKnown RBP17.04■□□□□ 0.32
CAPN1-203ENST00000525013 TBCELQ5QJ74 424 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 TMEM198Q66K66 360 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 BICRALQ6AI39 1079 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 FRMD7Q6ZUT3 714 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 TICAM1Q8IUC6 712 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 CCDC116Q8IYX3 515 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 C4orf33Q8N1A6 199 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 C17orf47Q8NEP4 570 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 CDC26Q8NHZ8 85 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 RDH11Q8TC12 318 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 C16orf78Q8WTQ4 265 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.04■□□□□ 0.32
CAPN1-203ENST00000525013 RND1Q92730 232 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 SARAFQ96BY9 339 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 ZNF597Q96LX8 424 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 ZNF681Q96N22 645 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 ZNF703Q9H7S9 590 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-203ENST00000525013 GIMAP4Q9NUV9 329 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 ALKBH4Q9NXW9 302 aa17.04■□□□□ 0.32
CAPN1-203ENST00000525013 ANKRD33BA6NCL7 494 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 HCN1O60741 890 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 CBX7O95931 251 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 ANXA4P09525 319 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-203ENST00000525013 PCSK2P16519 638 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 GDF1P27539 372 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 ABCD3P28288 659 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 MASP1P48740 699 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 TRPC1P48995 793 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 NUP107P57740 925 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 RPP38P78345 283 aaKnown RBP17.03■□□□□ 0.32
CAPN1-203ENST00000525013 MRPS35P82673 323 aaKnown RBP17.03■□□□□ 0.32
CAPN1-203ENST00000525013 DUSP8Q13202 625 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 HEPACAMQ14CZ8 416 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 WLSQ5T9L3 541 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 ACAD11Q709F0 780 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 PACS2Q86VP3 889 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 CCDC71Q8IV32 467 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-203ENST00000525013 LIX1Q8N485 282 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 SIMC1Q8NDZ2 872 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 OR52R1Q8NGF1 315 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 SPPL2AQ8TCT8 520 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 ASB5Q8WWX0 329 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 RILPQ96NA2 401 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 ITPAQ9BY32 194 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 SHCBP1LQ9BZQ2 653 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 ANKZF1Q9H8Y5 726 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 PRODH2Q9UF12 536 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms