RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SETD9Q8NE22 299 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 DNAAF1Q8NEP3 725 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 ZNF397Q8NF99 534 aaPredicted RBP6.27□□□□□ -1.41
NEDD8-203ENST00000524927 ZNF398Q8TD17 642 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 CENPIQ92674 756 aaPredicted RBP6.27□□□□□ -1.41
NEDD8-203ENST00000524927 FAF2Q96CS3 445 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 NPAS2Q99743 824 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 THAP2Q9H0W7 228 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 SRMSQ9H3Y6 488 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 ZDHHC11Q9H8X9 412 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 KCNK13Q9HB14 408 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 SEMA4BQ9NPR2 832 aaPredicted RBP6.27□□□□□ -1.41
NEDD8-203ENST00000524927 KRT84Q9NSB2 600 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 CUTCQ9NTM9 273 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 TAS2R10Q9NYW0 307 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 FBXO2Q9UK22 296 aaPredicted RBP6.27□□□□□ -1.41
NEDD8-203ENST00000524927 NEU3Q9UQ49 428 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 PTGDR2Q9Y5Y4 395 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 ARHGAP21Q5T5U3 1957 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 IGHV4-30-2A0A087WSY4 118 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 C17orf100A8MU93 164 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 C2orf74A8MZ97 194 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 EEF1E1-BLOC1S5C9J1V9 151 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 EEF1E1O43324 174 aaKnown RBP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 CEP104O60308 925 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 PRAMEF11O60813 436 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 SLC25A14O95258 325 aaPredicted RBP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 NUDT3O95989 172 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 IGHV4-39P01824 125 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 KRT13P13646 458 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 CHMP24386 653 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 OPRM1P35372 400 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 TIMP3P35625 211 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 SRP14P37108 136 aaKnown RBP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 PTPN9P43378 593 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 CYB561P49447 251 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 MXI1P50539 228 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 NR0B1P51843 470 aaKnown RBP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 ZNF136P52737 540 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 UFM1P61960 85 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 SIX1Q15475 284 aaPredicted RBP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 ZIC1Q15915 447 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 TAZQ16635 292 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 SLC25A52Q3SY17 297 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 TMEM268Q5VZI3 342 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 TMEM205Q6UW68 189 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 C11orf57Q6ZUT1 292 aaPredicted RBP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 TRILQ7L0X0 811 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 RRM2BQ7LG56 351 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 HOOK3Q86VS8 718 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 NDUFAF2Q8N183 169 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 DNAJC22Q8N4W6 341 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 SLC5A8Q8N695 610 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 RTL3Q8N8U3 475 aaKnown RBP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 ZNF441Q8N8Z8 693 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 TBC1D31Q96DN5 1066 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 RBM24Q9BX46 236 aaKnown RBP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 ZNF304Q9HCX3 659 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 PEMTQ9UBM1 199 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 DNPEPQ9ULA0 475 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 PCDHA7Q9UN72 937 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 ICKQ9UPZ9 632 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 COLEC10Q9Y6Z7 277 aa6.26□□□□□ -1.41
NEDD8-203ENST00000524927 DYNC2H1Q8NCM8 4307 aaKnown RBP6.26□□□□□ -1.41
NEDD8-203ENST00000524927 TEX13CA0A0J9YWL9 993 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 RGSL1A5PLK6 1076 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 F5H0A9 414 aaPredicted RBP6.25□□□□□ -1.41
NEDD8-203ENST00000524927 BTN3A3O00478 584 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 PDXKO00764 312 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 IL1AP01583 271 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 UBL4AP11441 157 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 COX7A2P14406 83 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 SLC25A16P16260 332 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 LOXP28300 417 aaPredicted RBP6.25□□□□□ -1.41
NEDD8-203ENST00000524927 EPHB2P29323 1055 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 DSCR9P59020 149 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 EFNB1P98172 346 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 PTP4A2Q12974 167 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 STIM1Q13586 685 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 RFTN1Q14699 578 aaPredicted RBP6.25□□□□□ -1.41
NEDD8-203ENST00000524927 PRICKLE4Q2TBC4 344 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 MZT2BQ6NZ67 158 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 SPESP1Q6UW49 350 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 LRIG3Q6UXM1 1119 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 UMODL1-AS1Q8N2C9 162 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 FBXW8Q8N3Y1 598 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 BANPQ8N9N5 519 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 ACVR1CQ8NER5 493 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 ADAMTS15Q8TE58 950 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 LCN9Q8WX39 176 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 MARK4Q96L34 752 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 PSKH2Q96QS6 385 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 PIGQQ9BRB3 760 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 CHCHD6Q9BRQ6 235 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 LLPHQ9BRT6 129 aaKnown RBP6.25□□□□□ -1.41
NEDD8-203ENST00000524927 MMP27Q9H306 513 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 MOV10Q9HCE1 1003 aaKnown RBP6.25□□□□□ -1.41
NEDD8-203ENST00000524927 C14orf105Q9NVL8 296 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms