RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 SIAEQ9HAT2 523 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 NTN4Q9HB63 628 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 MRM3Q9HC36 420 aaKnown RBP3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 SLCO1B3Q9NPD5 702 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 POLE3Q9NRF9 147 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 SMYD2Q9NRG4 433 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 OLA1Q9NTK5 396 aaKnown RBP3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 TMEM30AQ9NV96 361 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 TBC1D13Q9NVG8 400 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 DDX18Q9NVP1 670 aaKnown RBP3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 TMEM161AQ9NX61 479 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 IL37Q9NZH6 218 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 COX16Q9P0S2 106 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 SLC17A7Q9P2U7 560 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 ZNF69Q9UC07 566 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 RSL24D1Q9UHA3 163 aaKnown RBP3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 GMEB2Q9UKD1 530 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 CDH7Q9ULB5 785 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 ABT1Q9ULW3 272 aaKnown RBP3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 ARHGAP26Q9UNA1 814 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 SCML2Q9UQR0 700 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 MFHAS1Q9Y4C4 1052 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 SCN8AQ9UQD0 1980 aa3.16□□□□□ -1.9
LINCR-0001-203ENST00000524047 A0A1B0GWJ7 208 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM92AA1XBS5 289 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 NPIPB11E5RHQ5 1161 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM72CH0Y354 149 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 hCG_2039718K7EN88 272 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 K7EPI3 171 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 KCNK1O00180 336 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 RAD51BO15315 384 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 HSPA12AO43301 675 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 DENRO43583 198 aaKnown RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZBTB14O43829 449 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 PIP5K1CO60331 668 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 RNASEH1O60930 286 aaKnown RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 SNNO75324 88 aaPredicted RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 FKBP6O75344 327 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 TADA2AO75478 443 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 CLN5O75503 358 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 IFNA16P05015 189 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 APOA4P06727 396 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 BPGMP07738 259 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 F7P08709 466 aaPredicted RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 SMIM18P0DKX4 95 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 IGHV4-30-4P0DP06 118 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 UQCRBP14927 111 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 CDH2P19022 906 aaPredicted RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 EDN2P20800 178 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 BGNP21810 368 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 RRM2P31350 389 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 GRIA1P42261 906 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 MAGEA12P43365 314 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 OR1G1P47890 313 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 HARS2P49590 506 aaKnown RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 NDST2P52849 883 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 LIMK2P53671 638 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 GEMP55040 296 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 DLX5P56178 289 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 CLDN2P57739 230 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 IRX4P78413 519 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 ELAVL2Q12926 359 aaKnown RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 CSTF3Q12996 717 aaKnown RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 VEPH1Q14D04 833 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 CHI3L2Q15782 390 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 UGP2Q16851 508 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 TMEM95Q3KNT9 176 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 ANKRD20A4Q4UJ75 823 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 SLC39A12Q504Y0 691 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 C6orf163Q5TEZ5 329 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM72AQ5TYM5 149 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM69BQ5VUD6 431 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM205BPQ63HN1 556 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 PDPK2PQ6A1A2 396 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM72DQ6L9T8 149 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 LRRC8EQ6NSJ5 796 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM180BQ6P0A1 224 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 PLBD1Q6P4A8 553 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 UGT2A3Q6UWM9 527 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 ADCK1Q86TW2 530 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 GPAT4Q86UL3 456 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 FAM72BQ86X60 149 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 CRLF3Q8IUI8 442 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 NUDCD3Q8IVD9 361 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 ATPAF2Q8N5M1 289 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 RFLNBQ8N5W9 214 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 NPWQ8N729 165 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 RTL3Q8N8U3 475 aaKnown RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 ZNF565Q8N9K5 539 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 DNAAF3Q8N9W5 541 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 PPHLN1Q8NEY8 458 aaKnown RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 TET1Q8NFU7 2136 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 OR52K2Q8NGK3 314 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 OR52K1Q8NGK4 314 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 RDH11Q8TC12 318 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 SPPL2BQ8TCT7 592 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 RAET1EQ8TD07 263 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 PPP4R1Q8TF05 950 aa3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 TRUB1Q8WWH5 349 aaKnown RBP3.15□□□□□ -1.91
LINCR-0001-203ENST00000524047 C3orf30Q96M34 536 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms