RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 CBWD1Q9BRT8 395 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 TRIM6Q9C030 488 aaPredicted RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 RNF41Q9H4P4 317 aaPredicted RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 CLIP2Q9UDT6 1046 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 BCAP29Q9UHQ4 241 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.19□□□□□ -1.9
SKP1-212ENST00000523966 PLA2G4CQ9UP65 541 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 ATG4BQ9Y4P1 393 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 DHX57Q6P158 1386 aaKnown RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 ABCC10Q5T3U5 1492 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 ITSN2Q9NZM3 1697 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 ABCC5O15440 1437 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 PLCH2O75038 1416 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 DAPK1P53355 1430 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 NAIPQ13075 1403 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 NCOA1Q15788 1441 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 ERCC6L2Q5T890 1561 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 CAMSAP2Q08AD1 1489 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 WDR7Q9Y4E6 1490 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 A0A1B0GU03 582 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 K7EQG2 157 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 TXNL1O43396 289 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 OR6B1O95007 311 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 NUDT14O95848 222 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 IGHG1P01857 330 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 CXCL10P02778 98 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 ACP1P24666 158 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 BRCC3P46736 316 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 NPY2RP49146 381 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 TKTL1P51854 596 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 GMFBP60983 142 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 TRA2BP62995 288 aaKnown RBP3.18□□□□□ -1.9
SKP1-212ENST00000523966 TMEM44Q2T9K0 475 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 EPC2Q52LR7 807 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 PARP10Q53GL7 1025 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 C9orf66Q5T8R8 295 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 RHBDD2Q6NTF9 364 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 ZNF343Q6P1L6 599 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 APOOLQ6UXV4 268 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 RBM43Q6ZSC3 357 aaKnown RBP3.18□□□□□ -1.9
SKP1-212ENST00000523966 RANBP3LQ86VV4 465 aaPredicted RBP3.18□□□□□ -1.9
SKP1-212ENST00000523966 KRTAP7-1Q8IUC3 87 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 ZNF619Q8N2I2 560 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 ARL14Q8N4G2 192 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 CHDHQ8NE62 594 aaPredicted RBP3.18□□□□□ -1.9
SKP1-212ENST00000523966 SSC4DQ8WTU2 575 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 FAM111AQ96PZ2 611 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 TSPAN18Q96SJ8 248 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 C19orf43Q9BQ61 176 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 ZNF577Q9BSK1 485 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 KRT23Q9C075 422 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 EGLN1Q9GZT9 426 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 RAB17Q9H0T7 212 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 ADNPQ9H2P0 1102 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 FAM124BQ9H5Z6 455 aaPredicted RBP3.18□□□□□ -1.9
SKP1-212ENST00000523966 TMEM231Q9H6L2 316 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 Q9HAA7 133 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 ABCC13Q9NSE7 274 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 PAK5Q9P286 719 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 SPASTQ9UBP0 616 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 LHX3Q9UBR4 397 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 NUDCQ9Y266 331 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 MRPL11Q9Y3B7 192 aaKnown RBP3.18□□□□□ -1.9
SKP1-212ENST00000523966 ZNF175Q9Y473 711 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 FKBP7Q9Y680 259 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 MYH15Q9Y2K3 1946 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 ARAP3Q8WWN8 1544 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 PTPRKQ15262 1439 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 SALL1Q9NSC2 1324 aa3.18□□□□□ -1.9
SKP1-212ENST00000523966 ADGRL2O95490 1459 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 SHANK2Q9UPX8 1470 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 NPIPA5A0A0B4J1W7 369 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 A0A0J9YVX5 310 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 A0A0U1RRA0 63 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 BICDL2A1A5D9 508 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 TRIM49BA6NDI0 452 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 ACOD1A6NK06 481 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 RPL37AP8A6NKH3 93 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 NPIPA5E9PKD4 350 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 CYB561D2O14569 222 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 BUB1O43683 1085 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 PRPSAP2O60256 369 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 GALR3O60755 368 aaPredicted RBP3.17□□□□□ -1.9
SKP1-212ENST00000523966 FRAT2O75474 233 aaPredicted RBP3.17□□□□□ -1.9
SKP1-212ENST00000523966 STAM2O75886 525 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 FOSL2P15408 326 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 SHC1P29353 583 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 MAGEA4P43358 317 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 ATXN3P54252 364 aaPredicted RBP3.17□□□□□ -1.9
SKP1-212ENST00000523966 SLC26A5P58743 744 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 STARD6P59095 220 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 CRMP1Q14194 572 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 SMC1AQ14683 1233 aaKnown RBP3.17□□□□□ -1.9
SKP1-212ENST00000523966 SNAI3Q3KNW1 292 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 HIGD2BQ4VC39 106 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 UNC50Q53HI1 259 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 DPY19L2P2Q6ZN68 376 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 MOB2Q70IA6 237 aa3.17□□□□□ -1.9
SKP1-212ENST00000523966 VPS36Q86VN1 386 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms