RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PPM1NQ8N819 430 aa23.62■■□□□ 1.37
PVT1-219ENST00000523427 ZNF615Q8N8J6 731 aa23.62■■□□□ 1.37
PVT1-219ENST00000523427 UBTD2Q8WUN7 234 aa23.62■■□□□ 1.37
PVT1-219ENST00000523427 NUDT8Q8WV74 236 aa23.62■■□□□ 1.37
PVT1-219ENST00000523427 NXNL1Q96CM4 212 aa23.62■■□□□ 1.37
PVT1-219ENST00000523427 TMEM41AQ96HV5 264 aa23.62■■□□□ 1.37
PVT1-219ENST00000523427 NXF5Q9H1B4 397 aaKnown RBP23.62■■□□□ 1.37
PVT1-219ENST00000523427 SERHLQ9NQF3 203 aa23.62■■□□□ 1.37
PVT1-219ENST00000523427 EIF3LQ9Y262 564 aaKnown RBP23.62■■□□□ 1.37
PVT1-219ENST00000523427 SMAD7O15105 426 aaKnown RBP23.61■■□□□ 1.37
PVT1-219ENST00000523427 ARHGEF9O43307 516 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 HEXAP06865 529 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 ABCB1P08183 1280 aaPredicted RBP23.61■■□□□ 1.37
PVT1-219ENST00000523427 PCSK6P29122 969 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 SPRP35270 261 aaPredicted RBP23.61■■□□□ 1.37
PVT1-219ENST00000523427 ARL1P40616 181 aaPredicted RBP23.61■■□□□ 1.37
PVT1-219ENST00000523427 XKP51811 444 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 KBTBD12Q3ZCT8 623 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 Q5PR19 223 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 C3orf62Q6ZUJ4 267 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 NUDT13Q86X67 352 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 CREG2Q8IUH2 290 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 OR14L1PQ8NHC6 308 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 ZPLD1Q8TCW7 415 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 ARSGQ96EG1 525 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 DPH5Q9H2P9 285 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 GALNT9Q9HCQ5 603 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 RYDENQ9NUL5 291 aaKnown RBP23.61■■□□□ 1.37
PVT1-219ENST00000523427 EHD3Q9NZN3 535 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 DTX4Q9Y2E6 619 aa23.61■■□□□ 1.37
PVT1-219ENST00000523427 FAM159BA6NKW6 160 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 ACTL6AO96019 429 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 LTA4HP09960 611 aaKnown RBP23.6■■□□□ 1.37
PVT1-219ENST00000523427 GFAPP14136 432 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 CPOXP36551 454 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 FUT7Q11130 342 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 PFKFB4Q16877 469 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 LIPJQ5W064 366 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 CXorf67Q86X51 503 aaPredicted RBP23.6■■□□□ 1.37
PVT1-219ENST00000523427 CIARTQ8N365 385 aaPredicted RBP23.6■■□□□ 1.37
PVT1-219ENST00000523427 OR4K14Q8NGD5 310 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 ISL2Q96A47 359 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 REPS1Q96D71 796 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 NODALQ96S42 347 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 C6orf203Q9P0P8 240 aaPredicted RBP23.6■■□□□ 1.37
PVT1-219ENST00000523427 BCAP29Q9UHQ4 241 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 RNF11Q9Y3C5 154 aa23.6■■□□□ 1.37
PVT1-219ENST00000523427 H7C1Q1 480 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 ZSCAN12O43309 604 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 GOSR1O95249 250 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 TCEA1P23193 301 aaKnown RBP23.59■■□□□ 1.37
PVT1-219ENST00000523427 CNTFP26441 200 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 STARP49675 285 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 CUL3Q13618 768 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 GRTP1Q5TC63 336 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 TRIM42Q8IWZ5 723 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 KCTD4Q8WVF5 259 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 TM9SF2Q99805 663 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 SFXN3Q9BWM7 321 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 BRINP2Q9C0B6 783 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 KLRF1Q9NZS2 232 aa23.59■■□□□ 1.37
PVT1-219ENST00000523427 SMPD2O60906 423 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 ICOSLGO75144 302 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 PPM1BO75688 479 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 MTHFD2P13995 350 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 GPX3P22352 226 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 ARFIP1P53367 373 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 FAM111BQ6SJ93 734 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 ZNF592Q92610 1267 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 OSBPL11Q9BXB4 747 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 IPPKQ9H8X2 491 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 NDRG3Q9UGV2 375 aa23.58■■□□□ 1.37
PVT1-219ENST00000523427 ARID1AO14497 2285 aa23.58■■□□□ 1.36
PVT1-219ENST00000523427 KIAA1324LA8MWY0 1029 aaPredicted RBP23.57■■□□□ 1.36
PVT1-219ENST00000523427 H0YIV9 168 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 RCBTB2O95199 551 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 KLK1P06870 262 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 CPN1P15169 458 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 IRF9Q00978 393 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 GTF2H2Q13888 395 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 EXOSC7Q15024 291 aaKnown RBP23.57■■□□□ 1.36
PVT1-219ENST00000523427 GTF2H2CQ6P1K8 395 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 ENPP6Q6UWR7 440 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 PRIMA1Q86XR5 153 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 SMPDL3BQ92485 455 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 OMA1Q96E52 524 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 Q96MF0 132 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 CDK15Q96Q40 435 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 ITPAQ9BY32 194 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 TSC22D4Q9Y3Q8 395 aa23.57■■□□□ 1.36
PVT1-219ENST00000523427 TLN2Q9Y4G6 2542 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 SYCE1LA8MT33 242 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 FAM171A2A8MVW0 826 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 SNPHO15079 494 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 CPMP14384 443 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 CRABP2P29373 138 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 GPX6P59796 221 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 PLCXD2Q0VAA5 305 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 CALCOCO2Q13137 446 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 SLC30A6Q6NXT4 461 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms