RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	RND1	Q92730	232 aa		11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	APIP	Q96GX9	242 aa		11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	TREX2	Q9BQ50	279 aa	Predicted RBP	11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	NXF5	Q9H1B4	397 aa	Known RBP	11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	L2HGDH	Q9H9P8	463 aa		11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	COQ3	Q9NZJ6	369 aa		11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	MCM8	Q9UJA3	840 aa		11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	BOK	Q9UMX3	212 aa	Predicted RBP	11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	TIMM22	Q9Y584	194 aa		11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	FAM215A	Q9Y5M1	114 aa		11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	PCNX3	Q9H6A9	2034 aa		11.36	□□□□□ -0.59
VEGFA-223	ENST00000523125	MED12	Q93074	2177 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	TRGV5	A0A0B4J1U4	118 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	SERTM1	A2A2V5	107 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	CAPN14	A8MX76	684 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	CBX7	O95931	251 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	PROC	P04070	461 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	ENO1	P06733	434 aa	Known RBP	11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	ABCB1	P08183	1280 aa	Predicted RBP	11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	ABCD3	P28288	659 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	HMOX2	P30519	316 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	CHRNB4	P30926	498 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	DEK	P35659	375 aa	Known RBP	11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	CASP3	P42574	277 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	ALDH9A1	P49189	494 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	EMD	P50402	254 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	FOXA1	P55317	472 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	HMGCS1	Q01581	520 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	TFF3	Q07654	80 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	LTB4R	Q15722	352 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	TRMT12	Q53H54	448 aa	Known RBP	11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	HLA-DQA1	Q5Y7H0	255 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	DESI1	Q6ICB0	168 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	ZNF585A	Q6P3V2	769 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	GALNT18	Q6P9A2	607 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	SCIMP	Q6UWF3	145 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	ZYG11A	Q6WRX3	759 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	GDF7	Q7Z4P5	450 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	TDRP	Q86YL5	185 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	CCDC71	Q8IV32	467 aa	Predicted RBP	11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	PRR22	Q8IZ63	422 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	GBP7	Q8N8V2	638 aa	Predicted RBP	11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	DIO2	Q92813	273 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	KLHL29	Q96CT2	875 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	RILP	Q96NA2	401 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	SPOCK3	Q9BQ16	436 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	TTYH2	Q9BSA4	534 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	DOHH	Q9BU89	302 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	FAIM2	Q9BWQ8	316 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	ANGPTL4	Q9BY76	406 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	BRINP2	Q9C0B6	783 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	SLC6A15	Q9H2J7	730 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	C12orf65	Q9H3J6	166 aa	Known RBP	11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	LDAH	Q9H6V9	325 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	TNFRSF12A	Q9NP84	129 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	ACKR4	Q9NPB9	350 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	QPCTL	Q9NXS2	382 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	PSME2	Q9UL46	239 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	DLGAP4	Q9Y2H0	992 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	STK38L	Q9Y2H1	464 aa		11.35	□□□□□ -0.59
VEGFA-223	ENST00000523125	AKAP9	Q99996	3911 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	TP53I11	O14683	189 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	PCDH7	O60245	1069 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	PLIN3	O60664	434 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	GLRA3	O75311	464 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	TOX	O94900	526 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	IL3	P08700	152 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	GLI4	P10075	376 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	MYL2	P10916	166 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	DRD2	P14416	443 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	PCSK2	P16519	638 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	IGFBP2	P18065	325 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	CRHR1	P34998	444 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	SLCO1A2	P46721	670 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	NAGLU	P54802	743 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	NRG3	P56975	720 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	MRPS35	P82673	323 aa	Known RBP	11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	NNAT	Q16517	81 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	SPIN4	Q56A73	249 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	TBCEL	Q5QJ74	424 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	C6orf163	Q5TEZ5	329 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	ACAD11	Q709F0	780 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	CNPY4	Q8N129	248 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	CCNYL1	Q8N7R7	359 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	NEIL3	Q8TAT5	605 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	C16orf78	Q8WTQ4	265 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	ASB5	Q8WWX0	329 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	SARAF	Q96BY9	339 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	TRIM44	Q96DX7	344 aa	Predicted RBP	11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	CCDC126	Q96EE4	140 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	ZNF597	Q96LX8	424 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	JSRP1	Q96MG2	331 aa	Predicted RBP	11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	DOCK7	Q96N67	2140 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	SECISBP2	Q96T21	854 aa	Known RBP	11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	ITPA	Q9BY32	194 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	UCK2	Q9BZX2	261 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	UBQLN3	Q9H347	655 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	ANKRA2	Q9H9E1	313 aa		11.34	□□□□□ -0.59
VEGFA-223	ENST00000523125	MID1IP1	Q9NPA3	183 aa		11.34	□□□□□ -0.59

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