RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 DUSP8Q13202 625 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 LTB4RQ15722 352 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 TBCELQ5QJ74 424 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 DESI1Q6ICB0 168 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 SCIMPQ6UWF3 145 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 LIX1Q8N485 282 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 ACBD4Q8NC06 268 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 CNRIP1Q96F85 164 aaPredicted RBP18.99■□□□□ 0.63
SDCBP-209ENST00000522243 KCNA7Q96RP8 456 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 FAIM2Q9BWQ8 316 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 ITPAQ9BY32 194 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 NPDC1Q9NQX5 325 aaPredicted RBP18.99■□□□□ 0.63
SDCBP-209ENST00000522243 B4GALT7Q9UBV7 327 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 PSME2Q9UL46 239 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 A0A1W2PPM1 405 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 ANKRD33BA6NCL7 494 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 WDR1O75083 606 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 ULK1O75385 1050 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 TRAPPC6AO75865 159 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 ATP1B1P05026 303 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 HSD3B1P14060 373 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 KRT15P19012 456 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 HSD3B2P26439 372 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 ABCD3P28288 659 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 SOX18P35713 384 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 MASP1P48740 699 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 TMED10P49755 219 aaKnown RBP18.98■□□□□ 0.63
SDCBP-209ENST00000522243 HMGCS1Q01581 520 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 TLE4Q04727 773 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 BTKQ06187 659 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 TFF3Q07654 80 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 MAP4K2Q12851 820 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 CSTF3Q12996 717 aaKnown RBP18.98■□□□□ 0.63
SDCBP-209ENST00000522243 TRMT12Q53H54 448 aaKnown RBP18.98■□□□□ 0.63
SDCBP-209ENST00000522243 C1orf185Q5T7R7 199 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 LCA5Q86VQ0 697 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 SLC22A9Q8IVM8 553 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 NEIL3Q8TAT5 605 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 ACMSDQ8TDX5 336 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 MZB1Q8WU39 189 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 APIPQ96GX9 242 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 RILPQ96NA2 401 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 ACPTQ9BZG2 426 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 ACKR4Q9NPB9 350 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 PFDN4Q9NQP4 134 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 RYDENQ9NUL5 291 aaKnown RBP18.98■□□□□ 0.63
SDCBP-209ENST00000522243 QPCTLQ9NXS2 382 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 MCM8Q9UJA3 840 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 UTS2RQ9UKP6 389 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 ZNF780BQ9Y6R6 833 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 ARHGAP21Q5T5U3 1957 aa18.98■□□□□ 0.63
SDCBP-209ENST00000522243 A0A0G2JNJ9 132 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 IL3P08700 152 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 ADH7P40394 386 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 CASP3P42574 277 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 ZFP36L2P47974 494 aaKnown RBP18.97■□□□□ 0.63
SDCBP-209ENST00000522243 TRA2BP62995 288 aaKnown RBP18.97■□□□□ 0.63
SDCBP-209ENST00000522243 RAE1P78406 368 aaKnown RBP18.97■□□□□ 0.63
SDCBP-209ENST00000522243 MRPS35P82673 323 aaKnown RBP18.97■□□□□ 0.63
SDCBP-209ENST00000522243 OR52R1Q8NGF1 315 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 L3HYPDHQ96EM0 354 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 C14orf79Q96F83 325 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 ZNF681Q96N22 645 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 GNRHR2Q96P88 292 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 ANGPTL4Q9BY76 406 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 Q9UFV3 132 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 ZNF639Q9UID6 485 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 DLGAP4Q9Y2H0 992 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 PLLPQ9Y342 182 aa18.97■□□□□ 0.63
SDCBP-209ENST00000522243 C15orf38-AP3S2A0A0A6YYH1 394 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 GNG14A0A1W2PPG7 69 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 GNB5O14775 395 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 PCDH7O60245 1069 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 CBX7O95931 251 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 ABCB1P08183 1280 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-209ENST00000522243 GSTA1P08263 222 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 PCSK2P16519 638 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 ELAVL4P26378 380 aaKnown RBP18.96■□□□□ 0.63
SDCBP-209ENST00000522243 TOMM20Q15388 145 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 FNDC7Q5VTL7 733 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 LIX1LQ8IVB5 337 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 CCDC116Q8IYX3 515 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 CCNYL1Q8N7R7 359 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 C17orf47Q8NEP4 570 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 EXOSC8Q96B26 276 aaKnown RBP18.96■□□□□ 0.63
SDCBP-209ENST00000522243 TREX2Q9BQ50 279 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-209ENST00000522243 EBPLQ9BY08 206 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 GSTO2Q9H4Y5 243 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 ANKRA2Q9H9E1 313 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 MID1IP1Q9NPA3 183 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 FETUBQ9UGM5 382 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 DCDC2Q9UHG0 476 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 ITGB1BP2Q9UKP3 347 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 EMCNQ9ULC0 261 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 CFL2Q9Y281 166 aa18.96■□□□□ 0.63
SDCBP-209ENST00000522243 NME6O75414 186 aaPredicted RBP18.95■□□□□ 0.62
SDCBP-209ENST00000522243 PPM1BO75688 479 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 SNX4O95219 450 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 SHBGP04278 402 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 GABRA1P14867 456 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms