RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 GJD2Q9UKL4 321 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 FEZF1A0PJY2 475 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 PCP4L1A6NKN8 68 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 C6P13671 934 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 TYRP1P17643 537 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 GABRA3P34903 492 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 TMEM107Q6UX40 140 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 TMED4Q7Z7H5 227 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 PLCZ1Q86YW0 608 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 SLC44A3Q8N4M1 653 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 PNLDC1Q8NA58 520 aaKnown RBP13.15□□□□□ -0.3
SYNPO-205ENST00000522122 PLA2G15Q8NCC3 412 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 HDHD5Q9BXW7 423 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 MVB12BQ9H7P6 319 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 NUDT15Q9NV35 164 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 BTNL2Q9UIR0 455 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 UNC119BA6NIH7 251 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 OR7A17O14581 309 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 SMAD6O43541 496 aaKnown RBP13.15□□□□□ -0.3
SYNPO-205ENST00000522122 GABARAPO95166 117 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 AHSA1O95433 338 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 PFKLP17858 780 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF81P51508 661 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 PSMA6P60900 246 aaKnown RBP13.15□□□□□ -0.3
SYNPO-205ENST00000522122 KLBQ86Z14 1044 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 GPR26Q8NDV2 337 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 SMPDL3BQ92485 455 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF300Q96RE9 604 aaPredicted RBP13.15□□□□□ -0.3
SYNPO-205ENST00000522122 SLC22A31A6NKX4 558 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 TEX46H3BTG2 121 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 EEF1E1O43324 174 aaKnown RBP13.14□□□□□ -0.31
SYNPO-205ENST00000522122 PRKYO43930 277 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 MMP2P08253 660 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 PGAM2P15259 253 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 VAMP1P23763 118 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 SOX2P48431 317 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 ACVR1Q04771 509 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 NUMA1Q14980 2115 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 LINC00299Q6ZSB3 139 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 OR9Q2Q8NGE9 314 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 TESCQ96BS2 214 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 TEX37Q96LM6 180 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 H3BSH0 61 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 AQP9O43315 295 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 KAT7O95251 611 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 CYB5AP00167 134 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 CYBAP13498 195 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 RPS21P63220 83 aaKnown RBP13.14□□□□□ -0.31
SYNPO-205ENST00000522122 NFE2L1Q14494 772 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 FAM189A2Q15884 450 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 HSD17B12Q53GQ0 312 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 MORN1Q5T089 497 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 ZFP41Q8N8Y5 198 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 ACPTQ9BZG2 426 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 BRF2Q9HAW0 419 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 HCN3Q9P1Z3 774 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 SLC16A6O15403 523 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 PRH1P02810 166 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 BMP4P12644 408 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 GP1BBP13224 206 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 TAS2R38P59533 333 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 PPP2R2DQ66LE6 453 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 OR4C11Q6IEV9 310 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 LRRC25Q8N386 305 aaPredicted RBP13.14□□□□□ -0.31
SYNPO-205ENST00000522122 RPLP0P6Q8NHW5 317 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 ADAMTS16Q8TE57 1224 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 UBTD2Q8WUN7 234 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 RTP3Q9BQQ7 232 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 SEC61A2Q9H9S3 476 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 NMNAT1Q9HAN9 279 aaPredicted RBP13.14□□□□□ -0.31
SYNPO-205ENST00000522122 SDHAF3Q9NRP4 125 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 PAQR5Q9NXK6 330 aaPredicted RBP13.14□□□□□ -0.31
SYNPO-205ENST00000522122 ABCG2Q9UNQ0 655 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 SMCHD1A6NHR9 2005 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 TMEM189-UBE2V1I3L0A0 370 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 KHNYNO15037 678 aaKnown RBP13.14□□□□□ -0.31
SYNPO-205ENST00000522122 IGLV3-25P01717 112 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 DHCR24Q15392 516 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 GDPGP1Q6ZNW5 385 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 CEP68Q76N32 757 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 IQCF2Q8IXL9 164 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 TSTD1Q8NFU3 115 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 THAP6Q8TBB0 222 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 MBOAT4Q96T53 435 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
SYNPO-205ENST00000522122 CHMP1AQ9HD42 196 aaPredicted RBP13.14□□□□□ -0.31
SYNPO-205ENST00000522122 A0A1W2PP55 124 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 FCER2P06734 321 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 MTHFD2P13995 350 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 PCGF2P35227 344 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 GGT2P36268 569 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 DEFA5Q01523 94 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 ITPRIPL2Q3MIP1 535 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 Q6ZSR9 355 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 OR5T3Q8NGG3 340 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 OR8K5Q8NH50 307 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 HCAR2Q8TDS4 363 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 ZNF486Q96H40 463 aaPredicted RBP13.13□□□□□ -0.31
SYNPO-205ENST00000522122 FAM83CQ9BQN1 747 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 HSFX1Q9UBD0 423 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms