RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 VAT1LQ9HCJ6 419 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 CENPMQ9NSP4 180 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 GPR83Q9NYM4 423 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 ERVK-18Q9QC07 812 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 LNPEPQ9UIQ6 1025 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 SALL1Q9NSC2 1324 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 NESP48681 1621 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 ADCY10Q96PN6 1610 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 FER1L5A0AVI2 2057 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 POLA1P09884 1462 aaPredicted RBP2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 PRR23AA6NEV1 266 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 FBLL1A6NHQ2 334 aaKnown RBP2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ANKRD30BLA7E2S9 258 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 TCP10L2B9ZVM9 353 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 H0YL77 283 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ANXA9O76027 345 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 LYNP07948 512 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 HCKP08631 526 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 RRASP10301 218 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 PAX7P23759 505 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 HTR2AP28223 471 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 PDHA2P29803 388 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 FCGR2CP31995 323 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 MMP12P39900 470 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ID1P41134 155 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 PTGER3P43115 390 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 TSFMP43897 325 aaKnown RBP2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 TRPC1P48995 793 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ACADVLP49748 655 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 HNMTP50135 292 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ERVK-16P61578 105 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 CDKL1Q00532 357 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 DHODHQ02127 395 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 CNTN2Q02246 1040 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 RBBP4Q09028 425 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZP4Q12836 540 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 CALCOCO2Q13137 446 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF177Q13360 481 aaPredicted RBP2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 NFATC2Q13469 925 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ENPP2Q13822 863 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 TMEM41BQ5BJD5 291 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 NCR3LG1Q68D85 454 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ASPHD2Q6ICH7 369 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 NIPAL3Q6P499 406 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ATRAIDQ6UW56 229 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF562Q6V9R5 426 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 GDPGP1Q6ZNW5 385 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 TBC1D10CQ8IV04 446 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF491Q8N8L2 437 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 STKLD1Q8NE28 680 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 DENND6BQ8NEG7 585 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 OR1K1Q8NGR3 316 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 WDR36Q8NI36 951 aaKnown RBP2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF519Q8TB69 540 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 GTF3AQ92664 365 aaKnown RBP2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ATXN7L3BQ96GX2 97 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 MAGED4Q96JG8 741 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 C4orf36Q96KX1 117 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 NSMCE3Q96MG7 304 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 RCHY1Q96PM5 261 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 USP28Q96RU2 1077 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 TXN2Q99757 166 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 CCDC28BQ9BUN5 200 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 CARD6Q9BX69 1037 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 WDR41Q9HAD4 459 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 NRN1Q9NPD7 142 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 BARHL2Q9NY43 387 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 PURGQ9UJV8 347 aaKnown RBP2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 IKZF3Q9UKT9 509 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF490Q9ULM2 529 aaPredicted RBP2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 MAB21L2Q9Y586 359 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZHX2Q9Y6X8 837 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 E9PCH4 1651 aa2.84□□□□□ -1.95
HMGN1P28-201ENST00000521340 CDC42BPAQ5VT25 1732 aa2.84□□□□□ -1.96
HMGN1P28-201ENST00000521340 CCNB3Q8WWL7 1395 aa2.84□□□□□ -1.96
HMGN1P28-201ENST00000521340 GRIN2BQ13224 1484 aa2.84□□□□□ -1.96
HMGN1P28-201ENST00000521340 WDR62O43379 1518 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 UGGT2Q9NYU1 1516 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 DNMT1P26358 1616 aaKnown RBP2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 LGALS8O00214 317 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 FBP2O00757 339 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 INPP4BO15327 924 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 PRAMEF12O95522 483 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 DUS4LO95620 317 aaKnown RBP2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 SEMA4FO95754 770 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 ECDO95905 644 aaPredicted RBP2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 MBD3O95983 291 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 IGLV1-44P01699 117 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 CA3P07451 260 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 THRBP10828 461 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 CLUP10909 449 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 PRKACGP22612 351 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 TMOD1P28289 359 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 CRIP2P52943 208 aaPredicted RBP2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 MTTPP55157 894 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 HILS1P60008 231 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 HAND2P61296 217 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 UBE2HP62256 183 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms