RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 TUBGCP4Q9UGJ1 667 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 IL20RAQ9UHF4 553 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 PLA2G4CQ9UP65 541 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 STYXL1Q9Y6J8 313 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 AFF2P51816 1311 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 FAM205AQ6ZU69 1335 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 ACOD1A6NK06 481 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 RNF212BA8MTL3 300 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 K7ERI5 159 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 PRPSAP2O60256 369 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 STAM2O75886 525 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 OAS1P00973 400 aaKnown RBP3.81□□□□□ -1.8
PTPN12-214ENST00000520947 MAPK3P27361 379 aaPredicted RBP3.81□□□□□ -1.8
PTPN12-214ENST00000520947 SPRP35270 261 aaPredicted RBP3.81□□□□□ -1.8
PTPN12-214ENST00000520947 PTGER3P43115 390 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 PEX6Q13608 980 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 KARSQ15046 597 aaKnown RBP3.81□□□□□ -1.8
PTPN12-214ENST00000520947 HAGHQ16775 308 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 AGAP7PQ5VUJ5 663 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 ZCCHC12Q6PEW1 402 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 REG3GQ6UW15 175 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 ISLR2Q6UXK2 745 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 AMZ2Q86W34 360 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 LINC00612Q8N6U2 182 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 ZNF491Q8N8L2 437 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 COLGALT1Q8NBJ5 622 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 NTNG2Q96CW9 530 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 RAB3CQ96E17 227 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 KRT23Q9C075 422 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 NRN1Q9NPD7 142 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 CNOT2Q9NZN8 540 aaKnown RBP3.81□□□□□ -1.8
PTPN12-214ENST00000520947 PLEKHA6Q9Y2H5 1048 aa3.81□□□□□ -1.8
PTPN12-214ENST00000520947 KLF2Q9Y5W3 355 aaPredicted RBP3.81□□□□□ -1.8
PTPN12-214ENST00000520947 A0A0A6YYD4 124 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 A0A1B0GTH9 108 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 PTBP3O95758 552 aaKnown RBP3.8□□□□□ -1.8
PTPN12-214ENST00000520947 HOXD4P09016 255 aaPredicted RBP3.8□□□□□ -1.8
PTPN12-214ENST00000520947 CCNA2P20248 432 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 IL10P22301 178 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 SLC6A8P48029 635 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 MYBPC1Q00872 1141 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 PCK2Q16822 640 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 ANKRD55Q3KP44 614 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 TOR1AIP1Q5JTV8 583 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 SLC25A30Q5SVS4 291 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 RFWD3Q6PCD5 774 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 FAM159AQ6UWV7 190 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 CWC27Q6UX04 472 aaKnown RBP3.8□□□□□ -1.8
PTPN12-214ENST00000520947 DPY19L2P2Q6ZN68 376 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 LUZP1Q86V48 1076 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 MLKLQ8NB16 471 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 CNNM3Q8NE01 707 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 MRPL38Q96DV4 380 aaKnown RBP3.8□□□□□ -1.8
PTPN12-214ENST00000520947 RPP25Q9BUL9 199 aaKnown RBP3.8□□□□□ -1.8
PTPN12-214ENST00000520947 ST6GALNAC5Q9BVH7 336 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 FAM124BQ9H5Z6 455 aaPredicted RBP3.8□□□□□ -1.8
PTPN12-214ENST00000520947 SOHLH2Q9NX45 425 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 TP53TG3Q9ULZ0 132 aa3.8□□□□□ -1.8
PTPN12-214ENST00000520947 UBE4BO95155 1302 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 SRRM5B3KS81 715 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 B3GALNT1O75752 331 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 RENP00797 406 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 FCGR3AP08637 254 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 UCP1P25874 307 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 CALML3P27482 149 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 TMOD1P28289 359 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 MATKP42679 507 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 SGSHP51688 502 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 RAG2P55895 527 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 SLC26A5P58743 744 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 ZFP36L1Q07352 338 aaKnown RBP3.79□□□□□ -1.8
PTPN12-214ENST00000520947 FUT7Q11130 342 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 NME3Q13232 169 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 CYLC2Q14093 348 aaPredicted RBP3.79□□□□□ -1.8
PTPN12-214ENST00000520947 CEBPEQ15744 281 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 IL23RQ5VWK5 629 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 LEMD1Q68G75 181 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 ARMCX5Q6P1M9 558 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 SLC25A42Q86VD7 318 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 HPS6Q86YV9 775 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 SLC39A11Q8N1S5 342 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 PYROXD2Q8N2H3 581 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 FBXL16Q8N461 479 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 CSNK1G2-AS1Q8NCQ2 148 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 ZNF397Q8NF99 534 aaPredicted RBP3.79□□□□□ -1.8
PTPN12-214ENST00000520947 DQX1Q8TE96 717 aaKnown RBP3.79□□□□□ -1.8
PTPN12-214ENST00000520947 BIRC7Q96CA5 298 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 CCDC51Q96ER9 411 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 CPXM1Q96SM3 734 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 NDUFAF3Q9BU61 184 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 NACA2Q9H009 215 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 ATG10Q9H0Y0 220 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 TMEM231Q9H6L2 316 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 ADGRL4Q9HBW9 690 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 STARD5Q9NSY2 213 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 SEC14L4Q9UDX3 406 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 HOOK1Q9UJC3 728 aaKnown RBP3.79□□□□□ -1.8
PTPN12-214ENST00000520947 EMCNQ9ULC0 261 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 CLCA3PQ9Y6N3 262 aa3.79□□□□□ -1.8
PTPN12-214ENST00000520947 CYB561D2O14569 222 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms