RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 GLYATL1Q969I3 302 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 SLC35B4Q969S0 331 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 KIAA1143Q96AT1 154 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 C11orf24Q96F05 449 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 TMEM80Q96HE8 168 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF514Q96K75 400 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 WDFY2Q96P53 400 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 AGAP4Q96P64 663 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF607Q96SK3 696 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 MGLLQ99685 303 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 MYOCQ99972 504 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 SPATA5L1Q9BVQ7 753 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 CDADC1Q9BWV3 514 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 UCK2Q9BZX2 261 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 ZDHHC5Q9C0B5 715 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 A4GALTQ9NPC4 353 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 POLE4Q9NR33 117 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 MS4A12Q9NXJ0 267 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF226Q9NYT6 803 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 USP36Q9P275 1121 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 THAP10Q9P2Z0 257 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 FTSJ1Q9UET6 329 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 STUB1Q9UNE7 303 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 SSR3Q9UNL2 185 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 SNX11Q9Y5W9 270 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 PTPRBP23467 1997 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 A0A1W2PRB8 838 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 SLC5A10A0PJK1 596 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 PIPSLA2A3N6 862 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 TRABD2BA6NFA1 517 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 METTL12A8MUP2 240 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 DSCR3O14972 297 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 TSPAN6O43657 245 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF821O75541 412 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 UGT2B17O75795 530 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 CCNKO75909 580 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 C6orf47O95873 294 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 B3GALT4O96024 378 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 PTHP01270 115 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 PRB1P04280 392 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 RPN2P04844 631 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 C1GALT1C1LP0DN25 315 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 OSMP13725 252 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 ETFAP13804 333 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 CD22P20273 847 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 CXCR2P25025 360 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 IMPA1P29218 277 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 EPHA2P29317 976 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 PPP2R1BP30154 601 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 ACSL1P33121 698 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 BDKRB1P46663 353 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 RPS5P46782 204 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 LIMS1P48059 325 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 RORCP51449 518 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 NUDT6P53370 316 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 PCBP3P57721 371 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 OR2B6P58173 313 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 TBPL1P62380 186 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 SCN1BQ07699 218 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 C2orf80Q0P641 193 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 SLC13A2Q13183 592 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 SELENBP1Q13228 472 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 SLBPQ14493 270 aaKnown RBP eCLIP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 BCL7AQ4VC05 210 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 PRAMEF14Q5SWL7 426 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 HENMT1Q5T8I9 393 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 DHRS13Q6UX07 377 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 CCBE1Q6UXH8 406 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 TMPRSS11AQ6ZMR5 421 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF517Q6ZMY9 492 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 DPY19L3Q6ZPD9 716 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 RAB43Q86YS6 212 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 OR8H2Q8N162 312 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 METTL4Q8N3J2 472 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 C16orf78Q8WTQ4 265 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 BTN2A2Q8WVV5 523 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 SLC5A11Q8WWX8 675 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 DNASE2BQ8WZ79 361 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 OR5P2Q8WZ92 322 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF486Q96H40 463 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF764Q96H86 408 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 BBC3Q96PG8 261 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 RHNO1Q9BSD3 238 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 TEX12Q9BXU0 123 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 HOXD1Q9GZZ0 328 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 SLC22A4Q9H015 551 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 ABCG8Q9H221 673 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 OR51E2Q9H255 320 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 TRIM45Q9H8W5 580 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 DKK3Q9UBP4 350 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 KCND3Q9UK17 655 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 PCDHGB2Q9Y5G2 931 aa8.17□□□□□ -1.1
CTNNA1-223ENST00000520520 IQCMA0A1B0GVH7 501 aa8.16□□□□□ -1.1
CTNNA1-223ENST00000520520 HYKKA2RU49 373 aa8.16□□□□□ -1.1
CTNNA1-223ENST00000520520 FAM25AB3EWG3 89 aa8.16□□□□□ -1.1
CTNNA1-223ENST00000520520 FAM25CB3EWG5 89 aa8.16□□□□□ -1.1
CTNNA1-223ENST00000520520 FAM25GB3EWG6 89 aa8.16□□□□□ -1.1
CTNNA1-223ENST00000520520 FAM47E-STBD1D6RA91 191 aa8.16□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF670-ZNF695F2Z2N8 137 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms