RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SLC25A23Q9BV35 468 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 STMN4Q9H169 189 aaPredicted RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 EPB41L4BQ9H329 900 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 CDC42EP4Q9H3Q1 356 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 CCDC134Q9H6E4 229 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 KIR3DX1Q9H7L2 352 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 CAB39LQ9H9S4 337 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 UCK1Q9HA47 277 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 BARX1Q9HBU1 254 aaPredicted RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 FAM212BQ9NTI7 297 aaPredicted RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 DNAJC11Q9NVH1 559 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ALKBH4Q9NXW9 302 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 Q9UFV3 132 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 PISDQ9UG56 409 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 TRPS1Q9UHF7 1281 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 LNPEPQ9UIQ6 1025 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 BAG5Q9UL15 447 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 SATB2Q9UPW6 733 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 DHRS7Q9Y394 339 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 LOXL2Q9Y4K0 774 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 NEUROG3Q9Y4Z2 214 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ENTPD2Q9Y5L3 495 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 TNRC6BQ9UPQ9 1833 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 ADAMTS9Q9P2N4 1935 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 A0A087WUV0 522 aaPredicted RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 MYOCOSA0A1B0GUC4 107 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 PIPSLA2A3N6 862 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 OR5K3A6NET4 321 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 EFCAB7A8K855 629 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 C2orf74A8MZ97 194 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 HNRNPCL2B2RXH8 293 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 BTN3A3O00478 584 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ST8SIA3O43173 380 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 TNFSF15O95150 251 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 C1orf105O95561 183 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 MT-ATP6P00846 226 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 CATP04040 527 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 FGF4P08620 206 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 CHRM5P08912 532 aaPredicted RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 HIST1H2AGP0C0S8 130 aaPredicted RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 CCDC166P0CW27 439 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 CCL4P13236 92 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ENO3P13929 434 aaPredicted RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 COX7A2P14406 83 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ITIH1P19827 911 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 HIST1H2ADP20671 130 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 CYP2A7P20853 494 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 GALP22466 123 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 JAK1P23458 1154 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 PRDX3P30048 256 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 SLC5A2P31639 672 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 SHMT2P34897 504 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 CAPZBP47756 277 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 LIMK2P53671 638 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 UCP2P55851 309 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 TAS2R39P59534 338 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 PPP1CAP62136 330 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 SRSF3P84103 164 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 TIAL1Q01085 375 aaKnown RBP eCLIP2.61□□□□□ -1.99
SKP1-204ENST00000517691 TAP2Q03519 686 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ZFP36L1Q07352 338 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 ABHD18Q0P651 414 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ILF2Q12905 390 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 NAB1Q13506 487 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 NR1D2Q14995 579 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ERCC6LQ2NKX8 1250 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ZNF750Q32MQ0 723 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 CCSMST1Q4G0I0 132 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 TAF1BQ53T94 588 aaPredicted RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 SH2D4BQ5SQS7 431 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 LGSNQ5TDP6 509 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 CYHR1Q6ZMK1 362 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 FRA10AC1Q70Z53 315 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 CYS1Q717R9 158 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 LARP4Q71RC2 724 aaKnown RBP eCLIP2.61□□□□□ -1.993e-6■□□□□ 10.8
SKP1-204ENST00000517691 TRMT10CQ7L0Y3 403 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 PIWIL4Q7Z3Z4 852 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 CLEC14AQ86T13 490 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ZNF605Q86T29 641 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 TRABD2AQ86V40 505 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 SLC22A9Q8IVM8 553 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 SERPINA12Q8IW75 414 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 DCUN1D3Q8IWE4 304 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 PHC2Q8IXK0 858 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 FAM9CQ8IZT9 166 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 MMP21Q8N119 569 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 LINC00482Q8N8I6 264 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 LMNTD1Q8N9Z9 388 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 UXS1Q8NBZ7 420 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 OR9A1PQ8NGU1 263 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 WDR36Q8NI36 951 aaKnown RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 CD200R1Q8TD46 325 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 UBLCP1Q8WVY7 318 aaPredicted RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 BCL2L2Q92843 193 aaPredicted RBP2.61□□□□□ -1.99
SKP1-204ENST00000517691 RAD51AP1Q96B01 352 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 RNF31Q96EP0 1072 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 ELMOD3Q96FG2 381 aa2.61□□□□□ -1.99
SKP1-204ENST00000517691 MED8Q96G25 268 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms