RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 GSTK1Q9Y2Q3 226 aa5.07□□□□□ -1.6
CTNNA1-202ENST00000517533 ZNF175Q9Y473 711 aa5.07□□□□□ -1.6
CTNNA1-202ENST00000517533 RIPK3Q9Y572 518 aa5.07□□□□□ -1.6
CTNNA1-202ENST00000517533 CARMIL1Q5VZK9 1371 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 MAP3K19Q56UN5 1328 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 CENPJQ9HC77 1338 aaPredicted RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 ZCWPW2A0A1B0GU75 182 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 MTMR11A4FU01 709 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 LILRA5A6NI73 299 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 LRRC30A6NM36 301 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 ZNF879B4DU55 563 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 H3BMH7 237 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 TULP2O00295 520 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 ARPC1BO15143 372 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 STK17BO94768 372 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 PMS2P2O95744 297 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 GLUD1P00367 558 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 KRT6AP02538 564 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 HOXC6P09630 235 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 CCDC172P0C7W6 258 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 DBTP11182 482 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 LHCGRP22888 699 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 ACKR3P25106 362 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 RBMS1P29558 406 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 TMPOP42166 694 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 CCT3P49368 545 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 GLUD2P49448 558 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 STARP49675 285 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 CDH4P55283 916 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 RPS18P62269 152 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 MRPS21P82921 87 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 ITGA9Q13797 1035 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 ZNF699Q32M78 642 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 NKAIN1Q4KMZ8 207 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 EFHC1Q5JVL4 640 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 LIN9Q5TKA1 542 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 KCNIP4Q6PIL6 250 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 ASB18Q6ZVZ8 466 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 KIAA1328Q86T90 577 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 NFAM1Q8NET5 270 aaPredicted RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 GPR148Q8TDV2 347 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 SCFD1Q8WVM8 642 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 ST8SIA1Q92185 356 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 PIK3R3Q92569 461 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 SH3YL1Q96HL8 342 aaPredicted RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 TGM7Q96PF1 710 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 UHRF2Q96PU4 802 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 PANX2Q96RD6 677 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 PAIP2Q9BPZ3 127 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 SLC29A3Q9BZD2 475 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 GEMIN7Q9H840 131 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 UBTD1Q9HAC8 227 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 HIF1ANQ9NWT6 349 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 RNF186Q9NXI6 227 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 ZNF224Q9NZL3 707 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 PEF1Q9UBV8 284 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 SIX4Q9UIU6 781 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 ADAM28Q9UKQ2 775 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 R4GN57 208 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 TAF1P21675 1872 aa5.06□□□□□ -1.6
CTNNA1-202ENST00000517533 TRAV25A0A0B4J276 109 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 A0A0G2JNG1 304 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 LOC100506127A0A0U1RQW1 187 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 CD8B2A6NJW9 211 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 GABRR3A8MPY1 467 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 GOLGA8TH3BQL2 631 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 BTN3A3O00478 584 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 RRP8O43159 456 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 SLC28A2O43868 658 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 MTRF1O75570 445 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 FAM106CPP0CH98 169 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 FCGR1AP12314 374 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 DARSP14868 501 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 SRMP19623 302 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 MSH3P20585 1137 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 PRKACBP22694 351 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 CSTF2P33240 577 aaKnown RBP eCLIP5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 ALDH3B1P43353 468 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 HTR5AP47898 357 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 CSNK1EP49674 416 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 CCR4P51679 360 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 PITX1P78337 314 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 DLG1Q12959 904 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 MFAP5Q13361 173 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 CUL1Q13616 776 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 RBM39Q14498 530 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 ZNF234Q14588 700 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 KIR2DS5Q14953 304 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 Q3ZCU0 254 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 LRRC37A5PQ49AS3 106 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 ACSF3Q4G176 576 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 XKR7Q5GH72 579 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 LIPNQ5VXI9 398 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 OR2A2Q6IF42 318 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 OR7E24Q6IFN5 339 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 TMEM220Q6QAJ8 160 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 UQCC3Q6UW78 93 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 EIF3MQ7L2H7 374 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 LUZP2Q86TE4 346 aa5.05□□□□□ -1.6
CTNNA1-202ENST00000517533 TCAIMQ8N3R3 496 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms