RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 KCTD2Q14681 263 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 ANKRD1Q15327 319 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 LRRC37A5PQ49AS3 106 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 RFTN2Q52LD8 501 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 SEL1L2Q5TEA6 688 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 UFSP1Q6NVU6 142 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 JMJD6Q6NYC1 403 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 DHRS11Q6UWP2 260 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 CLEC17AQ6ZS10 378 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 MFN1Q8IWA4 741 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 CCDC60Q8IWA6 550 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 C9orf40Q8IXQ3 194 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 TIGD4Q8IY51 512 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 NOA1Q8NC60 698 aaKnown RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 CHDHQ8NE62 594 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 CD99L2Q8TCZ2 262 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 ZKSCAN4Q969J2 545 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 NDNQ99608 321 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 REEP2Q9BRK0 252 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 UBA5Q9GZZ9 404 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 ADGRL4Q9HBW9 690 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 HOMER2Q9NSB8 354 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 SETD4Q9NVD3 440 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 NUFIP1Q9UHK0 495 aaKnown RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 CAMK2AQ9UQM7 478 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 LRCH1Q9Y2L9 728 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 CENPJQ9HC77 1338 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 TLDC2A0PJX2 215 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 K7EMT4 169 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 ZNF73O43830 326 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 OR10H3O60404 316 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 KIAA0754O94854 1291 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 RTN3O95197 1032 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 NAPSAO96009 420 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 MT-ND2P03891 347 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 YES1P07947 543 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 PPP2R1AP30153 589 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 C17orf67Q0P5P2 114 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 VEZF1Q14119 521 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 GRB14Q14449 540 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 ZIC1Q15915 447 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 DEFB115Q30KQ5 88 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 WDR78Q5VTH9 848 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 NXNQ6DKJ4 435 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 ADNP2Q6IQ32 1131 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 USP50Q70EL3 339 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 SRLQ86TD4 932 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 FAM177A1Q8N128 213 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 LY6G5BQ8NDX9 201 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 ZCCHC10Q8TBK6 192 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 FAM151AQ8WW52 585 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 RTN4IP1Q8WWV3 396 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 SGCDQ92629 289 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 TSACCQ96A04 125 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 VPS33AQ96AX1 596 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 NEURL3Q96EH8 262 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 NOL4LQ96MY1 436 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 RASL11BQ9BPW5 248 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 TIMM29Q9BSF4 260 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 OPN3Q9H1Y3 402 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 CDC42EP4Q9H3Q1 356 aaKnown RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 RNF41Q9H4P4 317 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 CHMP1AQ9HD42 196 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 TAS2R16Q9NYV7 291 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 KCND2Q9NZV8 630 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 IL20RAQ9UHF4 553 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 GNPTGQ9UJJ9 305 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 FEM1BQ9UK73 627 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 SMC3Q9UQE7 1217 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 SH3GLB1Q9Y371 365 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 COLEC10Q9Y6Z7 277 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 PDZD2O15018 2839 aa-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 RSF1Q96T23 1441 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-539P-201ENST00000516665 A0A1W2PR77 199 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 TUBAL3A6NHL2 446 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 C4orf51C9J302 202 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 H3BMM5 538 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 TNFSF14O43557 240 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 KIF5CO60282 957 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 GOT2P00505 430 aaKnown RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 KRT18P05783 430 aaKnown RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 MYL3P08590 195 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 IGFBP5P24593 272 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 CTNNA2P26232 953 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 PRDX3P30048 256 aaKnown RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 MAPK4P31152 587 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 HARS2P49590 506 aaKnown RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 SH3BGRP55822 239 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 NEXNQ0ZGT2 675 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 CNTN1Q12860 1018 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 GRB7Q14451 532 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 NSDHLQ15738 373 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 HAGHQ16775 308 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 ANO1Q5XXA6 986 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 RPUSD3Q6P087 351 aaKnown RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 CFAP77Q6ZQR2 320 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 BHLHA15Q7RTS1 189 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 SBSPONQ8IVN8 264 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 CNTN4Q8IWV2 1026 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 TCEAL8Q8IYN2 117 aa-1.85□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms