RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 ZBTB20Q9HC78 741 aaPredicted RBP11.04□□□□□ -0.64
SNF8-215ENST00000515572 DDX18Q9NVP1 670 aaKnown RBP11.04□□□□□ -0.64
SNF8-215ENST00000515572 TMEM45AQ9NWC5 275 aa11.04□□□□□ -0.64
SNF8-215ENST00000515572 TAS2R9Q9NYW1 312 aa11.04□□□□□ -0.64
SNF8-215ENST00000515572 ZIM2Q9NZV7 527 aa11.04□□□□□ -0.64
SNF8-215ENST00000515572 DCTN4Q9UJW0 460 aa11.04□□□□□ -0.64
SNF8-215ENST00000515572 RNASET2O00584 256 aaKnown RBP11.03□□□□□ -0.64
SNF8-215ENST00000515572 PRKNO60260 465 aaPredicted RBP11.03□□□□□ -0.64
SNF8-215ENST00000515572 OR2J2O76002 312 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 WDPCPO95876 746 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 IL6P05231 212 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 GPX3P22352 226 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 S100A3P33764 101 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 TRHRP34981 398 aaPredicted RBP11.03□□□□□ -0.64
SNF8-215ENST00000515572 PTGER1P34995 402 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 SOX18P35713 384 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 MC3RP41968 323 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 EMDP50402 254 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 ATP4BP51164 291 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 SSR4P51571 173 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 NME5P56597 212 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 UFM1P61960 85 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 DCAF7P61962 342 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 PSPHP78330 225 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 PRR5P85299 388 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 KLRB1Q12918 225 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 EXOSC7Q15024 291 aaKnown RBP11.03□□□□□ -0.64
SNF8-215ENST00000515572 TLR1Q15399 786 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 FAM174BQ3ZCQ3 159 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 PIGGQ5H8A4 983 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 SPANXN4Q5MJ08 99 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 ANXA8L1Q5VT79 327 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 OPN5Q6U736 354 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 DND1Q8IYX4 353 aaKnown RBP11.03□□□□□ -0.64
SNF8-215ENST00000515572 TMEM156Q8N614 296 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 RBMXL3Q8N7X1 1067 aaKnown RBP11.03□□□□□ -0.64
SNF8-215ENST00000515572 TEX19Q8NA77 164 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 PSMA8Q8TAA3 256 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 SLC22A8Q8TCC7 542 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 MARK4Q96L34 752 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 BBC3Q96PG8 261 aaPredicted RBP11.03□□□□□ -0.64
SNF8-215ENST00000515572 GAL3ST4Q96RP7 486 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 RABEP2Q9H5N1 569 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 TRIM45Q9H8W5 580 aaPredicted RBP11.03□□□□□ -0.64
SNF8-215ENST00000515572 C3orf14Q9HBI5 128 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 NEUROD4Q9HD90 331 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 MRGBPQ9NV56 204 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 FAM120CQ9NX05 1096 aaKnown RBP11.03□□□□□ -0.64
SNF8-215ENST00000515572 NTMQ9P121 344 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 KLHL14Q9P2G3 628 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 PCDHGB4Q9UN71 923 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 C19orf53Q9UNZ5 99 aaPredicted RBP11.03□□□□□ -0.64
SNF8-215ENST00000515572 B3GNT3Q9Y2A9 372 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 PIEZO2Q9H5I5 2752 aa11.03□□□□□ -0.64
SNF8-215ENST00000515572 TRAV17A0A0B4J275 112 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 PRSS51A0A1B0GVH4 220 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 WWP2O00308 870 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 UPK1AO00322 258 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 CFLARO15519 480 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 MAN1A2O60476 641 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 DRD5P21918 477 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 LSP1P33241 339 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 CD96P40200 585 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 CYB561P49447 251 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 TNFSF10P50591 281 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 HLCSP50747 726 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 CDK9P50750 372 aaKnown RBP11.02□□□□□ -0.65
SNF8-215ENST00000515572 ARFIP2P53365 341 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 NRG3P56975 720 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 OC90Q02509 493 aaPredicted RBP11.02□□□□□ -0.65
SNF8-215ENST00000515572 DUSP8Q13202 625 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 TUBA3CQ13748 450 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 SQLEQ14534 574 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 OR4F3Q6IEY1 312 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 TUBA3EQ6PEY2 450 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 TMEM64Q6YI46 380 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 Q6ZS92 163 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 TAGAPQ8N103 731 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 ZNF441Q8N8Z8 693 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 NUDT8Q8WV74 236 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 ASB15Q8WXK1 588 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 ADIPOR1Q96A54 375 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 PNPLA2Q96AD5 504 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 TEX37Q96LM6 180 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 RASL10BQ96S79 203 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 TMEM120AQ9BXJ8 343 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 ITPAQ9BY32 194 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 LIN28AQ9H9Z2 209 aaKnown RBP11.02□□□□□ -0.65
SNF8-215ENST00000515572 FAM53CQ9NYF3 392 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 HEMK1Q9Y5R4 338 aaPredicted RBP11.02□□□□□ -0.65
SNF8-215ENST00000515572 EXPH5Q8NEV8 1989 aa11.02□□□□□ -0.65
SNF8-215ENST00000515572 FAM234BA2RU67 622 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 GMNCA6NCL1 334 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 TTC36A6NLP5 189 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 EIF4E1BA6NMX2 242 aaKnown RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 A8MVJ9 347 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 CAPN14A8MX76 684 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 ACOX3O15254 700 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 EMC8O43402 210 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 PSMG1O95456 288 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms