RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SCRN2Q96FV2 425 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 Q96MT0 163 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 NT5MQ9NPB1 228 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 DIABLOQ9NR28 239 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 TAS2R13Q9NYV9 303 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 RAPGEFL1Q9UHV5 662 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 TMPRSS11EQ9UL52 423 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 FCF1Q9Y324 198 aaKnown RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 PCDHB1Q9Y5F3 818 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 USP34Q70CQ2 3546 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 FAM86C2PA6NEL3 165 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 TUBAL3A6NHL2 446 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 GOLGA8CPA6NN73 597 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 STMND1H3BQB6 276 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 MANBAO00462 879 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 MT-CO1P00395 513 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 S100A6P06703 90 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 PTX3P26022 381 aaPredicted RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 SERPINB1P30740 379 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 HNF1BP35680 557 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 MMP12P39900 470 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 RABIFP47224 123 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 KIAA1024LP59773 190 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 ALDH6A1Q02252 535 aaKnown RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 ACY1Q03154 408 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 ARSIQ5FYB1 569 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 PLAG1Q6DJT9 500 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 SLC23A3Q6PIS1 610 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF517Q6ZMY9 492 aaPredicted RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 LAX1Q8IWV1 398 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 AVL9Q8NBF6 648 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 GPR151Q8TDV0 419 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 SEMA3CQ99985 751 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 C1QTNF2Q9BXJ5 285 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 CD244Q9BZW8 370 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 WNT5BQ9H1J7 359 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 SEMA4BQ9NPR2 832 aaPredicted RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 CATSPERZQ9NTU4 200 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 LIPT1Q9Y234 373 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 CFL2Q9Y281 166 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 BOLA1Q9Y3E2 137 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 KPNA3O00505 521 aaPredicted RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 KHNYNO15037 678 aaKnown RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 MID1O15344 667 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 MAN1A2O60476 641 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 SLC43A1O75387 559 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 MPC2O95563 127 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 CNOT4O95628 575 aaKnown RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 TPOP07202 933 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 CAPN1P07384 714 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 YES1P07947 543 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 CTPS1P17812 591 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 HNRNPA2B1P22626 353 aaKnown RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 KDELR2P33947 212 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 MAPK12P53778 367 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 BTG1P62324 171 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF155Q12901 538 aaPredicted RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 ARHGEF7Q14155 803 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 LYPLAL1Q5VWZ2 237 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 SPESP1Q6UW49 350 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 ANGPTL8Q6UXH0 198 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 MACC1Q6ZN28 852 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF600Q6ZNG1 722 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 ADGRG3Q86Y34 549 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 KBTBD8Q8NFY9 601 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 OR11H4Q8NGC9 324 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 CAPSLQ8WWF8 208 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 ARRDC3Q96B67 414 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 PPP3R2Q96LZ3 170 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF578Q96N58 590 aaPredicted RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 CHCHD6Q9BRQ6 235 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 SPNS1Q9H2V7 528 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 FGF20Q9NP95 211 aaPredicted RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 RAI2Q9Y5P3 530 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 CHD7Q9P2D1 2997 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 A0A0G2JK05 382 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 A0A1W2PPC4 97 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 A0A1W2PQ09 198 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 MED26O95402 600 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 CER1O95813 267 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 EPPINO95925 133 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 TRBC1P01850 177 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 ICAM2P13598 275 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 DRD3P35462 400 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 ARFIP1P53367 373 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 C2orf80Q0P641 193 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 MLLT11Q13015 90 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-205ENST00000514271 GTF2H2Q13888 395 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 ODF1Q14990 250 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 CSRP2Q16527 193 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 SLC36A2Q495M3 483 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 ATP6AP1LQ52LC2 224 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 MEDAGQ5VYS4 303 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 KIAA1211LQ6NV74 962 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 GTF2H2CQ6P1K8 395 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 KLHL17Q6TDP4 642 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 TEX261Q6UWH6 196 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 Q6ZPB1 254 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-205ENST00000514271 NUP54Q7Z3B4 507 aa6.99□□□□□ -1.29
CLIP1-205ENST00000514271 PHC2Q8IXK0 858 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms