RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 ZNF474Q6S9Z5 364 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 ENPP6Q6UWR7 440 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 GRAMD2AQ8IUY3 354 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 ZCCHC7Q8N3Z6 543 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 ZNF615Q8N8J6 731 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 CNEP1R1Q8N9A8 125 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 HUS1BQ8NHY5 278 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 STARD4Q96DR4 205 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 NODALQ96S42 347 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 CD244Q9BZW8 370 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 OPN3Q9H1Y3 402 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 OR10A5Q9H207 317 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 ACBD3Q9H3P7 528 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 CXorf21Q9HAI6 301 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 ASB4Q9Y574 426 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 PLOD2O00469 737 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 PHGDHO43175 533 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 WISP3O95389 354 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 CD79BP40259 229 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 PTGDSP41222 190 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 SLC12A2P55011 1212 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 TNK1Q13470 666 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 CAPRIN1Q14444 709 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 C22orf34Q6ZV56 151 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 PDIK1LQ8N165 341 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 WDSUB1Q8N9V3 476 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 CTHRC1Q96CG8 243 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 MTERF1Q99551 399 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 NXF5Q9H1B4 397 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 DTX4Q9Y2E6 619 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 MTO1Q9Y2Z2 717 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 TEX264Q9Y6I9 313 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 HEATR5AQ86XA9 2040 aa18.42■□□□□ 0.54
SQSTM1-215ENST00000514093 NBEAL1Q6ZS30 2694 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 PGRMC2O15173 223 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 PPM1BO75688 479 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 AIFM1O95831 613 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 NR2F6P10588 404 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 CD1DP15813 335 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 TCEA1P23193 301 aaKnown RBP18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 LOXP28300 417 aaPredicted RBP18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 CCKARP32238 428 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 GALNSP34059 522 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 UGT2B10P36537 528 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 GMPRP36959 345 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 FNTAP49354 379 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 LHX2P50458 406 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 GFRA1P56159 465 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 FUT7Q11130 342 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 E2F2Q14209 437 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 CDKL4Q5MAI5 379 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 ANKRD34AQ69YU3 496 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 MRM1Q6IN84 353 aaKnown RBP18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 ZNF662Q6ZS27 426 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 PLEKHM3Q6ZWE6 761 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 P4HA3Q7Z4N8 544 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 BTLAQ7Z6A9 289 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 GALNT12Q8IXK2 581 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 PDPRQ8NCN5 879 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 HGDQ93099 445 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 PGM2Q96G03 612 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 PBKQ96KB5 322 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 MARK4Q96L34 752 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 OSBPL11Q9BXB4 747 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 ZNF717Q9BY31 904 aaPredicted RBP18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 OR2B2Q9GZK3 357 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 ACTR8Q9H981 624 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 POPDC3Q9HBV1 291 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 EHD3Q9NZN3 535 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 KLRF1Q9NZS2 232 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 EXPH5Q8NEV8 1989 aa18.41■□□□□ 0.54
SQSTM1-215ENST00000514093 PGRMC1O00264 195 aaKnown RBP18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 CBR3O75828 277 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 GBAP04062 536 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 FAM58BPP0C7Q3 252 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 POU2F1P14859 743 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 EPB42P16452 691 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 CNTFP26441 200 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 EEF1A1P68104 462 aaKnown RBP18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 EEF1A1P5Q5VTE0 462 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 SLC30A6Q6NXT4 461 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 CYP20A1Q6UW02 462 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 LRRC70Q7Z2Q7 622 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 IFNEQ86WN2 208 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 CENPKQ9BS16 269 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 RHOJQ9H4E5 214 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 TAS2R10Q9NYW0 307 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 RNF112Q9ULX5 631 aa18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 EXO1Q9UQ84 846 aaKnown RBP18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 RAI1Q7Z5J4 1906 aaPredicted RBP18.4■□□□□ 0.54
SQSTM1-215ENST00000514093 A0A0A6YYD5 115 aa18.39■□□□□ 0.53
SQSTM1-215ENST00000514093 CDH16O75309 829 aa18.39■□□□□ 0.53
SQSTM1-215ENST00000514093 S100BP04271 92 aaPredicted RBP18.39■□□□□ 0.53
SQSTM1-215ENST00000514093 C8BP07358 591 aa18.39■□□□□ 0.53
SQSTM1-215ENST00000514093 GPX3P22352 226 aa18.39■□□□□ 0.53
SQSTM1-215ENST00000514093 CHMP24386 653 aa18.39■□□□□ 0.53
SQSTM1-215ENST00000514093 IVDP26440 423 aa18.39■□□□□ 0.53
SQSTM1-215ENST00000514093 SERPINB1P30740 379 aa18.39■□□□□ 0.53
SQSTM1-215ENST00000514093 BSGP35613 385 aa18.39■□□□□ 0.53
SQSTM1-215ENST00000514093 KCNJ5P48544 419 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms