RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 SAP130Q9H0E3 1048 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 SEC14L3Q9UDX4 400 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 UBQLN2Q9UHD9 624 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 IL20RAQ9UHF4 553 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 HCN1O60741 890 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ADH1AP07327 375 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 PCGF2P35227 344 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 NUDT1P36639 197 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ETV5P41161 510 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 SRP9P49458 86 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 ETV1P50549 477 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ATP12AP54707 1039 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 RGS1Q08116 209 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 CRYZQ08257 329 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 HSPB3Q12988 150 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ZBTB37Q5TC79 503 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 OLIG3Q7RTU3 272 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 GLRX5Q86SX6 157 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 LSM14AQ8ND56 463 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 NARS2Q96I59 477 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 FCRL4Q96PJ5 515 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 KATNB1Q9BVA0 655 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 GTPBP2Q9BX10 602 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 SLC7A5P2Q9GIP4 190 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 MBD1Q9UIS9 605 aaPredicted RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 PADI2Q9Y2J8 665 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ENPP4Q9Y6X5 453 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 GFYI3L273 518 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 RFXAPO00287 272 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 SLC28A2O43868 658 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 FGF18O76093 207 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 KDM4BO94953 1096 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 PLATP00750 562 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 IL1AP01583 271 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 H1F0P07305 194 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 BUD31P41223 144 aaPredicted RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 MAP4K2Q12851 820 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 PIN1Q13526 163 aaPredicted RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 POM121L1PQ3SYA9 428 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 LIPJQ5W064 366 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 CEACAM20Q6UY09 585 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 HSDL2Q6YN16 418 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 RBM45Q8IUH3 476 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 COQ8AQ8NI60 647 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 XAGE5Q8WWM1 108 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 KAT2AQ92830 837 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 TIFAQ96CG3 184 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ACER3Q9NUN7 267 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 MRPL39Q9NYK5 338 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 HCN3Q9P1Z3 774 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 BAIAP2Q9UQB8 552 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 KCNE1BA0A087WTH5 132 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 IQCMA0A1B0GVH7 501 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 M0R233 179 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 QSOX1O00391 747 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 SGTAO43765 313 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 PAHP00439 452 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 CATP04040 527 aaKnown RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 M6PRP20645 277 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 VIPR1P32241 457 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 SOX18P35713 384 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.13□□□□□ -0.951e-7■■■■□ 23
VCAN-210ENST00000513960 GDPGP1Q6ZNW5 385 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 MSANTD1Q6ZTZ1 278 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 IQCHQ86VS3 1027 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 THOC6Q86W42 341 aaKnown RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 FTMTQ8N4E7 242 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 OR4M2Q8NGB6 313 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 OR8J1Q8NGP2 316 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 FOPNLQ96NB1 174 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.13□□□□□ -0.95
VCAN-210ENST00000513960 B3GAT2Q9NPZ5 323 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 CCL26Q9Y258 94 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 A0A0A6YYJ9 748 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 CXorf51AA0A1B0GTR3 108 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 CTSAP10619 480 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 OSMP13725 252 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 PRPH2P23942 346 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 ETV3P41162 512 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 ASMTP46597 345 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 TSPAN5P62079 268 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 MLLT11Q13015 90 aaPredicted RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 KCNC3Q14003 757 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 ZXDCQ2QGD7 858 aaPredicted RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 UNC5DQ6UXZ4 953 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 SLC51BQ86UW2 128 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 LSRQ86X29 649 aaPredicted RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 ZNF655Q8N720 491 aaPredicted RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 OR2T35Q8NGX2 323 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 RFT1Q96AA3 541 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 TOX2Q96NM4 488 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 RIOK2Q9BVS4 552 aaKnown RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 TEX13CA0A0J9YWL9 993 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 A0A1W2PPK0 400 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 A0A1W2PRB8 838 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 GTPBP1O00178 669 aaKnown RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 PRKYO43930 277 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 PRMT3O60678 531 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 PROS1P07225 676 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 CD3GP09693 182 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms