RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 THOC5Q13769 683 aaKnown RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 CYB5R2Q6BCY4 276 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 ZNF470Q6ECI4 717 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 ZNF549Q6P9A3 640 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 AGTRAPQ6RW13 159 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 LCTLQ6UWM7 567 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 SBSNQ6UWP8 590 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 UBE2R2Q712K3 238 aaPredicted RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 PIWIL4Q7Z3Z4 852 aaKnown RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 STRA8Q7Z7C7 330 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 MREGQ8N565 214 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 CNEP1R1Q8N9A8 125 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 FAM83FQ8NEG4 500 aaPredicted RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 GABPB2Q8TAK5 448 aaPredicted RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 UBLCP1Q8WVY7 318 aaPredicted RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 GTPBP3Q969Y2 492 aaKnown RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 PYCR2Q96C36 320 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 CTHRC1Q96CG8 243 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 RILPQ96NA2 401 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 PCBD2Q9H0N5 130 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 ACSS3Q9H6R3 686 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 PPANQ9NQ55 473 aaKnown RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 ZNF281Q9Y2X9 895 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 IKBKGQ9Y6K9 419 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 CADP27708 2225 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 A0A087WUV0 522 aaPredicted RBP8.23□□□□□ -1.09
NUP54-211ENST00000512151 EIF3FO00303 357 aaPredicted RBP8.23□□□□□ -1.09
NUP54-211ENST00000512151 UBFD1O14562 309 aaKnown RBP8.23□□□□□ -1.09
NUP54-211ENST00000512151 ZBTB14O43829 449 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 SSX4O60224 188 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 CD8AP01732 235 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 ESR1P03372 595 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 IGKV3-11P04433 115 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 ABHD2P08910 425 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 DPP4P27487 766 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 STX2P32856 288 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 STARP49675 285 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 PGGT1BP53609 377 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 SIRPAP78324 504 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 TIAL1Q01085 375 aaKnown RBP eCLIP8.23□□□□□ -1.09
NUP54-211ENST00000512151 TBL3Q12788 808 aaKnown RBP8.23□□□□□ -1.09
NUP54-211ENST00000512151 TOMM20Q15388 145 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 NTRK2Q16620 822 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 PHKG1Q16816 387 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 RBM20Q5T481 1227 aaKnown RBP8.23□□□□□ -1.09
NUP54-211ENST00000512151 MRNIPQ6NTE8 343 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 DGAT2L6Q6ZPD8 337 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 LMNTD2Q8IXW0 634 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 ZNF610Q8N9Z0 462 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 OR2W6PQ8NHA6 318 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 NUBPLQ8TB37 319 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 DIO2Q92813 273 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 MRRFQ96E11 262 aaKnown RBP8.23□□□□□ -1.09
NUP54-211ENST00000512151 ZMYND19Q96E35 227 aaPredicted RBP8.23□□□□□ -1.09
NUP54-211ENST00000512151 RHNO1Q9BSD3 238 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 FAM167BQ9BTA0 163 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 KLHL4Q9C0H6 718 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 CHODLQ9H9P2 273 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 ELOVL5Q9NYP7 299 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 PDE10AQ9Y233 779 aa8.23□□□□□ -1.09
NUP54-211ENST00000512151 HMX2A2RU54 273 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 ANKRD33BA6NCL7 494 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 POC1B-GALNT4F8VUJ3 575 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 H3BMM5 538 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 PLOD2O00469 737 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 GNB5O14775 395 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 POLR3GO15318 223 aaPredicted RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 CTNSO60931 367 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 LDB3O75112 727 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 ACTL6AO96019 429 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 TNNI3P19429 210 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 TBXA2RP21731 343 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 PTPN6P29350 595 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 HNRNPH1P31943 449 aaKnown RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 PHBP35232 272 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 AHRP35869 848 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 FBXW4P57775 412 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 EEF1A1P68104 462 aaKnown RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 REEP5Q00765 189 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 PGGHGQ32M88 737 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 HSP90B2PQ58FF3 399 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 EEF1A1P5Q5VTE0 462 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 ADAM5Q6NVV9 412 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 MILR1Q7Z6M3 343 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 SDCCAG8Q86SQ7 713 aaPredicted RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 WFDC8Q8IUA0 241 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 GRAMD2AQ8IUY3 354 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 CTAGE3PQ8IX95 158 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 ZNF595Q8IYB9 648 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 SLC15A4Q8N697 577 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 OTUD6BQ8N6M0 293 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 CALML6Q8TD86 181 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 SMAP2Q8WU79 429 aaPredicted RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 DCAKDQ8WVC6 231 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 UCN3Q969E3 161 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 ZBTB9Q96C00 473 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 SENP5Q96HI0 755 aaPredicted RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 HS6ST2Q96MM7 605 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 TCF12Q99081 682 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 SLC39A3Q9BRY0 314 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms