RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 NDUFV2P19404 249 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MDKP21741 143 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ALAS2P22557 587 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 RBMS1P29558 406 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SOAT1P35610 550 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 BCL6P41182 706 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GLP1RP43220 463 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 OMPP47874 163 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR3A3P47888 321 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR3A2P47893 321 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC6A12P48065 614 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MXI1P50539 228 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CAPZA1P52907 286 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GEMP55040 296 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SEC13P55735 322 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C21orf59P57076 290 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CDK3Q00526 305 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLAMF1Q13291 335 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ILKQ13418 452 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 BOP1Q14137 746 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 NR6A1Q15406 480 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DGUOKQ16854 277 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SYT16Q17RD7 645 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 KLHL38Q2WGJ6 581 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLA1AQ53H76 456 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LY6G6FQ5SQ64 297 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C10orf120Q5SQS8 335 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SYPL2Q5VXT5 272 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF324BQ6AW86 544 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 KRTAP5-3Q6L8H2 238 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATRAIDQ6UW56 229 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 NXPE4Q6UWF7 544 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLEKHG7Q6ZR37 379 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM83HQ6ZRV2 1179 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LANCL3Q6ZV70 420 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARHGAP22Q7Z5H3 698 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARPINQ7Z6K5 226 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PROSER1Q86XN7 944 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TCEAL8Q8IYN2 117 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DTWD1Q8N5C7 304 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC15A4Q8N697 577 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GOLM1Q8NBJ4 401 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MINDY2Q8NBR6 621 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MORN4Q8NDC4 146 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C16orf78Q8WTQ4 265 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C15orf40Q8WUR7 153 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GTF2H4Q92759 462 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPL3LQ92901 407 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 BORCS5Q969J3 196 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCDC126Q96EE4 140 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SH3YL1Q96HL8 342 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C9orf72Q96LT7 481 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR4K3Q96R72 315 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 YME1L1Q96TA2 773 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EPYCQ99645 322 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GABRG3Q99928 467 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SH2D3AQ9BRG2 576 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZPBPQ9BS86 351 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 BTBD10Q9BSF8 475 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 HES7Q9BYE0 225 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C6orf62Q9GZU0 229 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ELOVL6Q9H5J4 265 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 NOL11Q9H8H0 719 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPCSQ9HAB8 311 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SCPEP1Q9HB40 452 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 WASH6PQ9NQA3 447 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 VSX1Q9NZR4 365 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EMC3Q9P0I2 261 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ITGA11Q9UKX5 1188 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 RAB26Q9ULW5 256 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ABCG2Q9UNQ0 655 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SAMD4AQ9UPU9 718 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TP53TG5Q9Y2B4 290 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LY6G6EA0A0G2JKS1 128 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 A0A0G2JND7 137 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C9JQL5 133 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 L7N2F9 121 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PODXLO00592 558 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRDMT1O14717 391 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PIP5K1BO14986 540 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PDPK1O15530 556 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TSPAN3O60637 253 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 UBXN7O94888 489 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 APOL3O95236 402 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PIGNO95427 931 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DLGAP3O95886 979 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SERPINA6P08185 405 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 HNRNPA1P09651 372 aaKnown RBP eCLIP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CD3GP09693 182 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TSPAN8P19075 237 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 AGXTP21549 392 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ITPKBP27987 946 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC7A1P30825 629 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 BMI1P35226 326 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPM1AP35813 382 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DLSTP36957 453 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF140P52738 457 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EFNA5P52803 228 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms