RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TCP10LQ8TDR4 215 aa12.23□□□□□ -0.45
RNF4-215ENST00000511843 PAQR8Q8TEZ7 354 aa12.23□□□□□ -0.45
RNF4-215ENST00000511843 SGCZQ96LD1 299 aa12.23□□□□□ -0.45
RNF4-215ENST00000511843 NXF5Q9H1B4 397 aaKnown RBP12.23□□□□□ -0.45
RNF4-215ENST00000511843 MKS1Q9NXB0 559 aa12.23□□□□□ -0.45
RNF4-215ENST00000511843 CNOT11Q9UKZ1 510 aaKnown RBP12.23□□□□□ -0.45
RNF4-215ENST00000511843 PSME2Q9UL46 239 aa12.23□□□□□ -0.45
RNF4-215ENST00000511843 MEMO1Q9Y316 297 aa12.23□□□□□ -0.45
RNF4-215ENST00000511843 CCL27Q9Y4X3 112 aa12.23□□□□□ -0.45
RNF4-215ENST00000511843 NPFFR2Q9Y5X5 522 aa12.23□□□□□ -0.45
RNF4-215ENST00000511843 ZNF780BQ9Y6R6 833 aa12.23□□□□□ -0.45
RNF4-215ENST00000511843 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.23□□□□□ -0.45
RNF4-215ENST00000511843 SERTM1A2A2V5 107 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 LRRC3CA6NJW4 275 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 ACOT7O00154 380 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 ADAM10O14672 748 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 TRIM13O60858 407 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 RFPL3SP0C7P2 107 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 UROSP10746 265 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 GRNP28799 593 aaKnown RBP12.22□□□□□ -0.45
RNF4-215ENST00000511843 ZNF763Q0D2J5 394 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 C2orf80Q0P641 193 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 NTRK2Q16620 822 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 GALNT18Q6P9A2 607 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 TRIM46Q7Z4K8 759 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 SLC22A16Q86VW1 577 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 TAGAPQ8N103 731 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 FBXW8Q8N3Y1 598 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 RPRMLQ8N4K4 120 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 OR7G1Q8NGA0 311 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 OR2T11Q8NH01 316 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 FAM57AQ8TBR7 257 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 AGR3Q8TD06 166 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 TP53INP1Q96A56 240 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 JSRP1Q96MG2 331 aaPredicted RBP12.22□□□□□ -0.45
RNF4-215ENST00000511843 TUBB1Q9H4B7 451 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 ZDHHC11Q9H8X9 412 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 IL1RL2Q9HB29 575 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 PLSCR2Q9NRY7 297 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 EHD3Q9NZN3 535 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 ZNF639Q9UID6 485 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 MID2Q9UJV3 735 aa12.22□□□□□ -0.45
RNF4-215ENST00000511843 PRSS44E7EML9 344 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 NPIPA2E9PIF3 369 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 NPIPA3F8WFD2 350 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 PRRG2O14669 202 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 AZIN1O14977 448 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 LINC00032P0C843 101 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 DRD2P14416 443 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 TACR1P25103 407 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 ABCD3P28288 659 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 ARRB2P32121 409 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 NAA20P61599 178 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 ZNF844Q08AG5 666 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 HEPACAMQ14CZ8 416 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 KRT71Q3SY84 523 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 ZNF628Q5EBL2 1059 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 NOXRED1Q6NXP6 359 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 BNC2Q6ZN30 1099 aaPredicted RBP12.21□□□□□ -0.45
RNF4-215ENST00000511843 TICAM1Q8IUC6 712 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 FAM109AQ8N4B1 249 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 MARVELD2Q8N4S9 558 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 DIO2Q92813 273 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 CTHRC1Q96CG8 243 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 EGLN2Q96KS0 407 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 DOHHQ9BU89 302 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 ROPN1BQ9BZX4 212 aaPredicted RBP12.21□□□□□ -0.45
RNF4-215ENST00000511843 ROPN1Q9HAT0 212 aaPredicted RBP12.21□□□□□ -0.45
RNF4-215ENST00000511843 RRAGDQ9NQL2 400 aaPredicted RBP12.21□□□□□ -0.45
RNF4-215ENST00000511843 SLC35C2Q9NQQ7 365 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 GIMAP2Q9UG22 337 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 EXO1Q9UQ84 846 aaKnown RBP12.21□□□□□ -0.45
RNF4-215ENST00000511843 ENTPD4Q9Y227 616 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 NAV2Q8IVL1 2488 aa12.21□□□□□ -0.45
RNF4-215ENST00000511843 NBPF19A0A087WUL8 3843 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 HCFC1P51610 2035 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 KIAA1549Q9HCM3 1950 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 C2orf72A6NCS6 295 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 SEC22BO75396 215 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 RSL1D1O76021 490 aaKnown RBP12.2□□□□□ -0.46
RNF4-215ENST00000511843 JUNP05412 331 aaKnown RBP12.2□□□□□ -0.46
RNF4-215ENST00000511843 DDCP20711 480 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 TRPC1P48995 793 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 EMDP50402 254 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 NRG3P56975 720 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 RPS6KA2Q15349 733 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 ARL13AQ5H913 290 aaPredicted RBP12.2□□□□□ -0.46
RNF4-215ENST00000511843 EMC4Q5J8M3 183 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 KANK2Q63ZY3 851 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 FAM71E1Q6IPT2 247 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 ANKRD26P1Q6NSI1 321 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 ARHGAP11AQ6P4F7 1023 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 MREGQ8N565 214 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 OR7G2Q8NG99 324 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 OR5M9Q8NGP3 310 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 CLHC1Q8NHS4 586 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.2□□□□□ -0.46
RNF4-215ENST00000511843 SPPL2AQ8TCT8 520 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 GFM2Q969S9 779 aaKnown RBP12.2□□□□□ -0.46
RNF4-215ENST00000511843 OMA1Q96E52 524 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms