RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 FAM111AQ96PZ2 611 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 ACCSQ96QU6 501 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 RPP25Q9BUL9 199 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 APOOQ9BUR5 198 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 KRT23Q9C075 422 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 FAM124BQ9H5Z6 455 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 TMEM231Q9H6L2 316 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 ABCC13Q9NSE7 274 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 NINJ2Q9NZG7 142 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 MIOXQ9UGB7 285 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 EMCNQ9ULC0 261 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 KLHDC2Q9Y2U9 406 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 FKBP7Q9Y680 259 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 RAD54L2Q9Y4B4 1467 aa2.71□□□□□ -1.97
TRAPPC11-207ENST00000511409 FAM205AQ6ZU69 1335 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 TRIM49BA6NDI0 452 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 FOXI3A8MTJ6 420 aaPredicted RBP2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 E9PAM4 449 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 RANBP6O60518 1105 aaKnown RBP2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 STAM2O75886 525 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 NUDT14O95848 222 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 GOT2P00505 430 aaKnown RBP2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 RENP00797 406 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 PDGFBP01127 241 aaPredicted RBP2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 TGFAP01135 160 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 CXCL10P02778 98 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 RALAP11233 206 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 GATA1P15976 413 aaPredicted RBP2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 HMGCLP35914 325 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 MAGEA4P43358 317 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 RABIFP47224 123 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 ATXN3P54252 364 aaPredicted RBP2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 MFAP2P55001 183 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 STARD6P59095 220 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 GMFBP60983 142 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 KARSQ15046 597 aaKnown RBP2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 PCK2Q16822 640 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 HIGD2BQ4VC39 106 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 C14orf28Q4W4Y0 310 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 VWA2Q5GFL6 755 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 NHLRC3Q5JS37 347 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 TOR1AIP1Q5JTV8 583 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 LDLRAP1Q5SW96 308 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 FAM219BQ5XKK7 198 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 SEL1L3Q68CR1 1132 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 RHBDD2Q6NTF9 364 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 ISLR2Q6UXK2 745 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 HIPK1Q86Z02 1210 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 ARL14Q8N4G2 192 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 HDDC3Q8N4P3 179 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF491Q8N8L2 437 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 ITLN1Q8WWA0 313 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 CPXM1Q96SM3 734 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 GPR174Q9BXC1 333 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 RAB17Q9H0T7 212 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 ATG10Q9H0Y0 220 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 C1orf21Q9H246 121 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 RCOR3Q9P2K3 495 aaPredicted RBP2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 CIDEBQ9UHD4 219 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 BCAP29Q9UHQ4 241 aa2.71□□□□□ -1.98
TRAPPC11-207ENST00000511409 A0A0A6YYD4 124 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF487B1APH4 448 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 RASGRF2O14827 1237 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 BUB1O43683 1085 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 PRPSAP2O60256 369 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 PDE5AO76074 875 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 OAS1P00973 400 aaKnown RBP2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZCCHC18P0CG32 403 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 GHRP10912 638 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 CYP11B1P15538 503 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 IL10P22301 178 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 PRDX2P32119 198 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 SAA4P35542 130 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 SLC6A8P48029 635 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 PRELPP51888 382 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ARHGDIAP52565 204 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 IL1RL1Q01638 556 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZKSCAN8Q15776 578 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 PKN2Q16513 984 aaKnown RBP2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 CCL14Q16627 93 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 PARP10Q53GL7 1025 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 CCDC92Q53HC0 331 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 EIPR1Q53HC9 387 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 TCTEX1D4Q5JR98 221 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 IRGCQ6NXR0 463 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 FAM159AQ6UWV7 190 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 OLFM4Q6UX06 510 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 RBM43Q6ZSC3 357 aaKnown RBP2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 P4HA3Q7Z4N8 544 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 TSEN54Q7Z6J9 526 aaKnown RBP2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 RANBP3LQ86VV4 465 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 AMZ2Q86W34 360 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ELMOD2Q8IZ81 293 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 SUMF1Q8NBK3 374 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ANKRD20A12PQ8NF67 263 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 OR4F17Q8NGA8 305 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF671Q8TAW3 534 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 LHX4Q969G2 390 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 SAMD8Q96LT4 415 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 OR4F4Q96R69 305 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms