RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 STXBP4Q6ZWJ1 553 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 SDCCAG8Q86SQ7 713 aaPredicted RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 EXOC3L1Q86VI1 746 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 CAMK1DQ8IU85 385 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 TMEM126BQ8IUX1 230 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 SLC44A2Q8IWA5 706 aaPredicted RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 NELFCDQ8IXH7 590 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 ARIH2OSQ8N7S6 290 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 PRELID2Q8N945 189 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 SIDT2Q8NBJ9 832 aaKnown RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 GRK7Q8WTQ7 553 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 RND1Q92730 232 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 HAS2Q92819 552 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 SLC35C1Q96A29 364 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 ZNF501Q96CX3 271 aaPredicted RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 ARHGEF26Q96DR7 871 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 SLC39A13Q96H72 371 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 SLC41A2Q96JW4 573 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 ZNF514Q96K75 400 aaPredicted RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 CCDC77Q9BR77 488 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 STRA6Q9BX79 667 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 TRIM31Q9BZY9 425 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 WDR12Q9GZL7 423 aaKnown RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 FAM192AQ9GZU8 254 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 LHPPQ9H008 270 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 CDC42EP4Q9H3Q1 356 aaKnown RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 GOLPH3Q9H4A6 298 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 LRRC19Q9H756 370 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 SEPSECSQ9HD40 501 aaKnown RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 SAR1AQ9NR31 198 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 OLFML3Q9NRN5 406 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.96□□□□□ -1.62
GYPB-212ENST00000511198 NPIPA1Q9UND3 350 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 RCE1Q9Y256 329 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 LRCH1Q9Y2L9 728 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 SNX24Q9Y343 169 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 C17orf113A0A1B0GUU1 675 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 NPIPB13A6NJU9 1138 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 SMIM23A6NLE4 172 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 NPIPB5A8MRT5 1133 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 NPIPB4C9JG80 1138 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 SYT5O00445 386 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 MAPK13O15264 365 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 P4HA2O15460 535 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 TBCAO75347 108 aaKnown RBP4.95□□□□□ -1.62
GYPB-212ENST00000511198 SKAP2O75563 359 aaPredicted RBP4.95□□□□□ -1.62
GYPB-212ENST00000511198 ACTL6BO94805 426 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 TTC4O95801 387 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 GAS8O95995 478 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 TPBGLP0DKB5 382 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 PKMP14618 531 aaKnown RBP4.95□□□□□ -1.62
GYPB-212ENST00000511198 ZNF30P17039 623 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 GM2AP17900 193 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 TNFAIP3P21580 790 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 HOXD3P31249 432 aaPredicted RBP4.95□□□□□ -1.62
GYPB-212ENST00000511198 PCK1P35558 622 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 PSMC2P35998 433 aaKnown RBP4.95□□□□□ -1.62
GYPB-212ENST00000511198 VHLP40337 213 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 PCP4P48539 62 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 PCYT1AP49585 367 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 ENTPD1P49961 510 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 CTSCP53634 463 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 RAD23BP54727 409 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 NUP107P57740 925 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 DSCR9P59020 149 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 ZP1P60852 638 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 PPP1CAP62136 330 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 RASA2Q15283 850 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 FNBP1LQ5T0N5 605 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 ATG9BQ674R7 924 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 LIN54Q6MZP7 749 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 IYDQ6PHW0 289 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 Q6ZSV7 163 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 ZNF720Q7Z2F6 126 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 UNC93AQ86WB7 457 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 TDRPQ86YL5 185 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 SLC13A5Q86YT5 568 aaPredicted RBP4.95□□□□□ -1.62
GYPB-212ENST00000511198 CBWD2Q8IUF1 395 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 SIAH3Q8IW03 269 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 LIX1Q8N485 282 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 TEKT4Q8WW24 435 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 DNAJC9Q8WXX5 260 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 PSMF1Q92530 271 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 PIGTQ969N2 578 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 ITFG2Q969R8 447 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 SNF8Q96H20 258 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 YIPF3Q9GZM5 350 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 ST6GALNAC4Q9H4F1 302 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 ESRP2Q9H6T0 727 aaKnown RBP4.95□□□□□ -1.62
GYPB-212ENST00000511198 DCLRE1BQ9H816 532 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 PARVGQ9HBI0 331 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 ABCC13Q9NSE7 274 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 FBXL4Q9UKA2 621 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 DNAJC12Q9UKB3 198 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 STK38LQ9Y2H1 464 aa4.95□□□□□ -1.62
GYPB-212ENST00000511198 PTRH2Q9Y3E5 179 aaKnown RBP4.95□□□□□ -1.62
GYPB-212ENST00000511198 A0A0D9SEW6 157 aa4.94□□□□□ -1.62
GYPB-212ENST00000511198 A8MUI8 341 aa4.94□□□□□ -1.62
GYPB-212ENST00000511198 ACOT8O14734 319 aa4.94□□□□□ -1.62
GYPB-212ENST00000511198 SMIM24O75264 130 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms