RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 XKR7Q5GH72 579 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 PRR22Q8IZ63 422 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 ZNF441Q8N8Z8 693 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 FAM13CQ8NE31 585 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 ADIPOR1Q96A54 375 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 SPACA9Q96E40 222 aaPredicted RBP12.9□□□□□ -0.34
DDX41-212ENST00000511040 FCRL1Q96LA6 429 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 SORT1Q99523 831 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 CCT7Q99832 543 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 C1orf50Q9BV19 199 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 ITPAQ9BY32 194 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 ZNF639Q9UID6 485 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 RP1L1Q8IWN7 2480 aaPredicted RBP12.9□□□□□ -0.34
DDX41-212ENST00000511040 MYO18BQ8IUG5 2567 aa12.9□□□□□ -0.34
DDX41-212ENST00000511040 ASH1LQ9NR48 2969 aaKnown RBP12.9□□□□□ -0.35
DDX41-212ENST00000511040 ZGRF1Q86YA3 2104 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 EML6Q6ZMW3 1958 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 CLEC18AA5D8T8 446 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 MYO1GB0I1T2 1018 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 KLRC4-KLRK1H3BQV0 150 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 FBXO45P0C2W1 286 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 BCKDHAP12694 445 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 ZNF24P17028 368 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 GPX3P22352 226 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 NCBP2P52298 156 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX41-212ENST00000511040 CLEC18BQ6UXF7 455 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 IKBIPQ70UQ0 350 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 SAMD14Q8IZD0 417 aaPredicted RBP12.89□□□□□ -0.35
DDX41-212ENST00000511040 FAM9CQ8IZT9 166 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 TAGAPQ8N103 731 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 FAM26EQ8N5C1 309 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 SLC15A4Q8N697 577 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 CLEC18CQ8NCF0 446 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 OR2M7Q8NG81 312 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 OR7G2Q8NG99 324 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 OR10G3Q8NGC4 313 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 ZNF675Q8TD23 568 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 CIDECQ96AQ7 238 aaPredicted RBP12.89□□□□□ -0.35
DDX41-212ENST00000511040 CTHRC1Q96CG8 243 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 METTL2AQ96IZ6 378 aaKnown RBP12.89□□□□□ -0.35
DDX41-212ENST00000511040 PPP3R2Q96LZ3 170 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 NXF5Q9H1B4 397 aaKnown RBP12.89□□□□□ -0.35
DDX41-212ENST00000511040 NKIRAS1Q9NYS0 192 aa12.89□□□□□ -0.35
DDX41-212ENST00000511040 RELNP78509 3460 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 FAM166BA8MTA8 275 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 TFECO14948 347 aaPredicted RBP12.88□□□□□ -0.35
DDX41-212ENST00000511040 P04436 131 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 RNF224P0DH78 156 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 EFNA1P20827 205 aaPredicted RBP12.88□□□□□ -0.35
DDX41-212ENST00000511040 GRK2P25098 689 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 NTSP30990 170 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 MPIP34949 423 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 PIGAP37287 484 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 MC3RP41968 323 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 DNASE1L1P49184 302 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 EMDP50402 254 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 FBXW4P57775 412 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 HSF1Q00613 529 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 PLGLB1Q02325 96 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 BST1Q10588 318 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 ATP6AP1LQ52LC2 224 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 ZNF385BQ569K4 471 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 PRAMEF20Q5VT98 475 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 TMEM107Q6UX40 140 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 SIAH3Q8IW03 269 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 LIX1Q8N485 282 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 FNDC5Q8NAU1 212 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 GOLM1Q8NBJ4 401 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 TP53INP1Q96A56 240 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 PPCDCQ96CD2 204 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 TUBGCP3Q96CW5 907 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 MAGED4Q96JG8 741 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 SGCZQ96LD1 299 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 GPR137Q96N19 417 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 GLIPR2Q9H4G4 154 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 REEP4Q9H6H4 257 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 SACM1LQ9NTJ5 587 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 PNPOQ9NVS9 261 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 TAS2R7Q9NYW3 318 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 SH3BP4Q9P0V3 963 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 WBP11Q9Y2W2 641 aaKnown RBP12.88□□□□□ -0.35
DDX41-212ENST00000511040 TMED5Q9Y3A6 229 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 RAP2CQ9Y3L5 183 aa12.88□□□□□ -0.35
DDX41-212ENST00000511040 HS6ST1O60243 411 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 H2AFXP16104 143 aaPredicted RBP12.87□□□□□ -0.35
DDX41-212ENST00000511040 CNR1P21554 472 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 RPL14P50914 215 aaKnown RBP12.87□□□□□ -0.35
DDX41-212ENST00000511040 PPIAP62937 165 aaKnown RBP12.87□□□□□ -0.35
DDX41-212ENST00000511040 CEBPEQ15744 281 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 C6orf136Q5SQH8 315 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 AGBL2Q5U5Z8 902 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 IL23RQ5VWK5 629 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 C1QL3Q5VWW1 255 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 SLC22A10Q63ZE4 541 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 FAM47EQ6ZV65 393 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 ZNF551Q7Z340 670 aaPredicted RBP12.87□□□□□ -0.35
DDX41-212ENST00000511040 ZFP62Q8NB50 900 aaPredicted RBP12.87□□□□□ -0.35
DDX41-212ENST00000511040 POGLUT1Q8NBL1 392 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 NUDT8Q8WV74 236 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 AMDHD1Q96NU7 426 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms