RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 BHLHB9Q6PI77 547 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CD200R1LQ6Q8B3 271 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 BAIAP2L2Q6UXY1 529 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CEACAM20Q6UY09 585 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 DEF8Q6ZN54 512 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 FAM83HQ6ZRV2 1179 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TSPAN33Q86UF1 283 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRIM48Q8IWZ4 208 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 LRRC56Q8IYG6 542 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CADM2Q8N3J6 435 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 KLHL36Q8N4N3 616 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TCEANCQ8N8B7 351 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC37A3Q8NCC5 494 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ATP6V1C2Q8NEY4 427 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 GPR156Q8NFN8 814 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR52I1Q8NGK6 324 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR5H6Q8NGV6 325 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR52N1Q8NH53 320 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 FIBINQ8TAL6 211 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 BBS10Q8TAM1 723 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TEX47Q8TBZ9 253 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 GNPDA2Q8TDQ7 276 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 RNFT2Q96EX2 444 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZBED6CLQ96FA7 236 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 RADILQ96JH8 1075 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 LRR1Q96L50 414 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRRC1Q96M27 445 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF582Q96NG8 517 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 FYTTD1Q96QD9 318 aaKnown RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CITED4Q96RK1 184 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 DCLRE1CQ96SD1 692 aaKnown RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PKP4Q99569 1192 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 MDFIQ99750 246 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PTPN18Q99952 460 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 SOSTQ9BQB4 213 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 C7orf50Q9BRJ6 194 aaKnown RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM43Q9BTV4 400 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 KATNB1Q9BVA0 655 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF717Q9BY31 904 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 GSX2Q9BZM3 304 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ACTR6Q9GZN1 396 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 MED28Q9H204 178 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 MIXL1Q9H2W2 232 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CLEC4MQ9H2X3 399 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ANKRD19PQ9H560 264 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 EPHX3Q9H6B9 360 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PPP1R3EQ9H7J1 279 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 DMRT3Q9NQL9 472 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PLSCR3Q9NRY6 295 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 GKN1Q9NS71 199 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 MED17Q9NVC6 651 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TVP23BQ9NYZ1 205 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 P2RX2Q9UBL9 471 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 SEC14L3Q9UDX4 400 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 KCNN3Q9UGI6 736 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CLEC2DQ9UHP7 191 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ACAD8Q9UKU7 415 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 NDRG2Q9UN36 371 aaKnown RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 NCKAP1Q9Y2A7 1128 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 HSPB11Q9Y547 144 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 STON1Q9Y6Q2 735 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 RNF215Q9Y6U7 377 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRPM7Q96QT4 1865 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRBV4-1A0A0J9YWV2 114 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRAMEF25A6NGN4 478 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ANKDD1BA6NHY2 528 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZSCAN5BA6NJL1 495 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 FAM170BA6NMN3 283 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 WASHC1A8K0Z3 465 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 KDM4EB2RXH2 506 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 K7ERQ8 282 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 M0R129 80 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 BTN3A3O00478 584 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CASC3O15234 703 aaKnown RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 GRM6O15303 877 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 PI15O43692 258 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ADAMTS4O75173 837 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 SOX14O95416 240 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CSF2P04141 144 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 HMGN1P05114 100 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 BCHEP06276 602 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 C1SP09871 688 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 MSL3P1P0C860 447 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CKBP12277 381 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ANXA3P12429 323 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 SRCP12931 536 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 POLR2CP19387 275 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TNNI3P19429 210 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 DDCP20711 480 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 XPAP23025 273 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 F8A1P23610 371 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 IMPA1P29218 277 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 RBMS1P29558 406 aaKnown RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ACSL1P33121 698 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR1D2P34982 312 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 HSD17B2P37059 387 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ETV5P41161 510 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 MTNR1AP48039 350 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 GIPRP48546 466 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 MTNR1BP49286 362 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms