RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CCR10P46092 362 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 PXNP49023 591 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-206ENST00000507875 PGDP52209 483 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 AP1S2P56377 157 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 B4GALNT1Q00973 533 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 IL24Q13007 206 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 RUNX2Q13950 521 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 PCOLCEQ15113 449 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 TRMT5Q32P41 509 aaKnown RBP6.72□□□□□ -1.33
CLCN3-206ENST00000507875 RAET1GQ6H3X3 334 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 KLHDC8AQ8IYD2 350 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 POU5F2Q8N7G0 328 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 PSD4Q8NDX1 1056 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 OR14K1Q8NGZ2 314 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 UBTD2Q8WUN7 234 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 TP53INP1Q96A56 240 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 OR52B2Q96RD2 323 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 ATOH8Q96SQ7 321 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 CITED2Q99967 270 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-206ENST00000507875 BARX1Q9HBU1 254 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-206ENST00000507875 PFDN4Q9NQP4 134 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 BEX4Q9NWD9 120 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-206ENST00000507875 SLC7A8Q9UHI5 535 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 LRRC42Q9Y546 428 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 KMT2EQ8IZD2 1858 aa6.72□□□□□ -1.33
CLCN3-206ENST00000507875 TCRBV21S2A2A0A5A6 115 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 MFSD2BA6NFX1 497 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 IGLON5A6NGN9 336 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 MEI4A8MW99 385 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 MYO1GB0I1T2 1018 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 PROB1E7EW31 1015 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 SCAMP2O15127 329 aaKnown RBP6.71□□□□□ -1.33
CLCN3-206ENST00000507875 KMOO15229 486 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 GRID2O43424 1007 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 LAMTOR5O43504 91 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 SPRY1O43609 319 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-206ENST00000507875 GPC4O75487 556 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 CIB2O75838 187 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 KRT36O76013 467 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 AKR7A3O95154 331 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 PSMG1O95456 288 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 TSPAN12O95859 305 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 DCNP07585 359 aaKnown RBP6.71□□□□□ -1.33
CLCN3-206ENST00000507875 UBTFL6P0CB48 400 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-206ENST00000507875 STAG3L3P0CL85 134 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 PRSS56P0CW18 603 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 PRKAR1AP10644 381 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 PRDX6P30041 224 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 NBL1P41271 181 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 STARP49675 285 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 PRRX1P54821 245 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 WNT3P56703 355 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 SLC25A3Q00325 362 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 C6orf163Q5TEZ5 329 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 SULT1C3Q6IMI6 304 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 GRHL2Q6ISB3 625 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 TMEM207Q6UWW9 146 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 EFL1Q7Z2Z2 1120 aaKnown RBP6.71□□□□□ -1.33
CLCN3-206ENST00000507875 C1orf210Q8IVY1 113 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 HM13Q8TCT9 377 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 STMN2Q93045 179 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 C19orf60Q96EN9 201 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 LINGO1Q96FE5 620 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 OR1F2PQ96R84 312 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 TIMM29Q9BSF4 260 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 DPEP2Q9H4A9 486 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 UCK1Q9HA47 277 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 RHBDL2Q9NX52 303 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 PAQR5Q9NXK6 330 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-206ENST00000507875 USP22Q9UPT9 525 aa6.71□□□□□ -1.33
CLCN3-206ENST00000507875 GOLGA8QA0A0J9YX86 632 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 LOC100653049A0A140TA62 436 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 SLC5A10A0PJK1 596 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 GOLGA8OA6NCC3 632 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 GOLGA8NF8WBI6 632 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 FPGTO14772 594 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 LATO43561 262 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 KRT34O76011 436 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 RPN2P04844 631 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 HNRNPA2B1P22626 353 aaKnown RBP6.71□□□□□ -1.34
CLCN3-206ENST00000507875 IL32P24001 234 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 AKT2P31751 481 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 TPMTP51580 245 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 ACTR3P61158 418 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 HERVK_113P63132 956 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 CDK3Q00526 305 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 TNFRSF17Q02223 184 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 SLC34A1Q06495 639 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 KLF10Q13118 480 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 RAPSNQ13702 412 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 ZMYND11Q15326 602 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 MAPRE2Q15555 327 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 CCDC6Q16204 474 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 LSM12Q3MHD2 195 aaKnown RBP6.71□□□□□ -1.34
CLCN3-206ENST00000507875 SPATS1Q496A3 300 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 MANEAQ5SRI9 462 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 KIAA0895LQ68EN5 471 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 TMEM108Q6UXF1 575 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 SLC36A4Q6YBV0 504 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 CYHR1Q6ZMK1 362 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms