RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 RNF212BA8MTL3 300 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 GHRP10912 638 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 FOLR2P14207 255 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 BCL3P20749 454 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 TMOD1P28289 359 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 SHC1P29353 583 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 CHRNA3P32297 505 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 HAND2P61296 217 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 MS4A2Q01362 244 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 ZNF85Q03923 595 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 GABPB1Q06547 395 aaPredicted RBP2.73□□□□□ -1.97
LSM6-205ENST00000507449 COX10Q12887 443 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 BTG3Q14201 252 aaPredicted RBP2.73□□□□□ -1.97
LSM6-205ENST00000507449 TMEM44Q2T9K0 475 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 ANKRD55Q3KP44 614 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 ACSF3Q4G176 576 aaPredicted RBP2.73□□□□□ -1.97
LSM6-205ENST00000507449 LDLRAP1Q5SW96 308 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 LINC00242Q5T6M2 205 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 SEL1L2Q5TEA6 688 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 AGAP7PQ5VUJ5 663 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 IL23RQ5VWK5 629 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 ATRAIDQ6UW56 229 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 OLFM4Q6UX06 510 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 DPY19L2P2Q6ZN68 376 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 RBM43Q6ZSC3 357 aaKnown RBP2.73□□□□□ -1.97
LSM6-205ENST00000507449 MOB2Q70IA6 237 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 PRSS48Q7RTY5 328 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 MLKLQ8NB16 471 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 CSNK1G2-AS1Q8NCQ2 148 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 OR4F17Q8NGA8 305 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 MCHR2Q969V1 340 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 C14orf79Q96F83 325 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 OR4F4Q96R69 305 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 KCNK16Q96T55 309 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 TTYH2Q9BSA4 534 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 GPR174Q9BXC1 333 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 RAB11FIP5Q9BXF6 653 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 TRIM6Q9C030 488 aaPredicted RBP2.73□□□□□ -1.97
LSM6-205ENST00000507449 ATG10Q9H0Y0 220 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 FAM124BQ9H5Z6 455 aaPredicted RBP2.73□□□□□ -1.97
LSM6-205ENST00000507449 TMEM231Q9H6L2 316 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 ALG9Q9H6U8 611 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 NGBQ9NPG2 151 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 RCOR3Q9P2K3 495 aaPredicted RBP2.73□□□□□ -1.97
LSM6-205ENST00000507449 MBD2Q9UBB5 411 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 MLXQ9UH92 298 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 EMCNQ9ULC0 261 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 MGAT4AQ9UM21 535 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 CPQQ9Y646 472 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 SYNJ2O15056 1496 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 A0A1B0GTH9 108 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 RNF222A6NCQ9 220 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 FOXI3A8MTJ6 420 aaPredicted RBP2.72□□□□□ -1.97
LSM6-205ENST00000507449 H3BMH7 237 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.72□□□□□ -1.97
LSM6-205ENST00000507449 K7ERI5 159 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 E2F3O00716 465 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 CYB561D2O14569 222 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 RASGRF2O14827 1237 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 BUB1O43683 1085 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 LANCL1O43813 399 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 RANBP6O60518 1105 aaKnown RBP2.72□□□□□ -1.97
LSM6-205ENST00000507449 TOXO94900 526 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 TBX6O95947 436 aaPredicted RBP2.72□□□□□ -1.97
LSM6-205ENST00000507449 FCGR3AP08637 254 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 GATA2P23769 480 aaPredicted RBP2.72□□□□□ -1.97
LSM6-205ENST00000507449 DNAJB1P25685 340 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 SPRP35270 261 aaPredicted RBP2.72□□□□□ -1.97
LSM6-205ENST00000507449 SAA4P35542 130 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 MATKP42679 507 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 MAGEA4P43358 317 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 RAG2P55895 527 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 SNX1Q13596 522 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 CD226Q15762 336 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 ZNF506Q5JVG8 444 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 DDI2Q5TDH0 399 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 C12orf60Q5U649 245 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 FAM219BQ5XKK7 198 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 RAET1GQ6H3X3 334 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 IRGCQ6NXR0 463 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 ARMCX5Q6P1M9 558 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 CWC27Q6UX04 472 aaKnown RBP2.72□□□□□ -1.97
LSM6-205ENST00000507449 STXBP4Q6ZWJ1 553 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 SYVN1Q86TM6 617 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 GTSCR1Q86UQ5 136 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 LUZP1Q86V48 1076 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 PYROXD2Q8N2H3 581 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 FGFRL1Q8N441 504 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 ARFGAP2Q8N6H7 521 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 ITLN1Q8WWA0 313 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 APOOQ9BUR5 198 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 NMNAT2Q9BZQ4 307 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 CCSER1Q9C0I3 900 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 RAB17Q9H0T7 212 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 ROPN1Q9HAT0 212 aaPredicted RBP2.72□□□□□ -1.97
LSM6-205ENST00000507449 ACTR3BQ9P1U1 418 aa2.72□□□□□ -1.97
LSM6-205ENST00000507449 RGSL1A5PLK6 1076 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 IMPA2O14732 288 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 MCF2LO15068 1137 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms