RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 C17orf47Q8NEP4 570 aa18.39■□□□□ 0.53
SNX25-204ENST00000506896 OR9A2Q8NGT5 310 aa18.39■□□□□ 0.53
SNX25-204ENST00000506896 CLHC1Q8NHS4 586 aa18.39■□□□□ 0.53
SNX25-204ENST00000506896 TP53INP1Q96A56 240 aa18.39■□□□□ 0.53
SNX25-204ENST00000506896 SCMH1Q96GD3 660 aa18.39■□□□□ 0.53
SNX25-204ENST00000506896 SIGLEC12Q96PQ1 595 aa18.39■□□□□ 0.53
SNX25-204ENST00000506896 GAL3ST4Q96RP7 486 aa18.39■□□□□ 0.53
SNX25-204ENST00000506896 LIN28AQ9H9Z2 209 aaKnown RBP18.39■□□□□ 0.53
SNX25-204ENST00000506896 HPF1Q9NWY4 346 aa18.39■□□□□ 0.53
SNX25-204ENST00000506896 PRODH2Q9UF12 536 aa18.39■□□□□ 0.53
SNX25-204ENST00000506896 COPG1Q9Y678 874 aaKnown RBP18.39■□□□□ 0.53
SNX25-204ENST00000506896 HECTD1Q9ULT8 2610 aa18.39■□□□□ 0.53
SNX25-204ENST00000506896 ATP8B1O43520 1251 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 PLOD3O60568 738 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 SLC25A12O75746 678 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 LRATO95237 230 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 IFI6P09912 130 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 LBPP18428 481 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 PRPS1L1P21108 318 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 PTGR1Q14914 329 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 C16orf47Q6ZP98 133 aaPredicted RBP18.38■□□□□ 0.53
SNX25-204ENST00000506896 TAGAPQ8N103 731 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 CYP4Z2PQ8N1L4 340 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 NATD1Q8N6N6 113 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 C16orf52Q8NHV5 167 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 ZFP28Q8NHY6 868 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 ZBED6CLQ96FA7 236 aaPredicted RBP18.38■□□□□ 0.53
SNX25-204ENST00000506896 AMDHD1Q96NU7 426 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 PRPF18Q99633 342 aaKnown RBP18.38■□□□□ 0.53
SNX25-204ENST00000506896 ATAD3AQ9NVI7 634 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 SH3BP4Q9P0V3 963 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 MARCOQ9UEW3 520 aaPredicted RBP18.38■□□□□ 0.53
SNX25-204ENST00000506896 BCAP29Q9UHQ4 241 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 ATP6V1HQ9UI12 483 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 ERVK-11Q9UQG0 969 aa18.38■□□□□ 0.53
SNX25-204ENST00000506896 POLEQ07864 2286 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 A0A087WV62 115 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 SCAMP2O15127 329 aaKnown RBP18.37■□□□□ 0.53
SNX25-204ENST00000506896 PDPK1O15530 556 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 CBX6O95503 412 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 CBX7O95931 251 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 SP1P08047 785 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 KITP10721 976 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 C21orf58P58505 322 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 MRPS35P82673 323 aaKnown RBP18.37■□□□□ 0.53
SNX25-204ENST00000506896 PRSS53Q2L4Q9 553 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 TRMT12Q53H54 448 aaKnown RBP18.37■□□□□ 0.53
SNX25-204ENST00000506896 SLC25A25Q6KCM7 469 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 OGFOD2Q6N063 350 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 FAM180AQ6UWF9 173 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 LARP4Q71RC2 724 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX25-204ENST00000506896 WDR75Q8IWA0 830 aaKnown RBP18.37■□□□□ 0.53
SNX25-204ENST00000506896 ZNF441Q8N8Z8 693 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 OR52R1Q8NGF1 315 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 SGCZQ96LD1 299 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 GLIPR2Q9H4G4 154 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 MED4Q9NPJ6 270 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 TIMMDC1Q9NPL8 285 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 AGPAT4Q9NRZ5 378 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 ACSS1Q9NUB1 689 aaPredicted RBP18.37■□□□□ 0.53
SNX25-204ENST00000506896 ZGRF1Q86YA3 2104 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 SVILO95425 2214 aa18.37■□□□□ 0.53
SNX25-204ENST00000506896 PLOD2O00469 737 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 SDHDO14521 159 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 OR6B1O95007 311 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 RASAL1O95294 804 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 G6PDP11413 515 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 GPX3P22352 226 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 PTGER1P34995 402 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 SOX18P35713 384 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 SOX3P41225 446 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 FRKP42685 505 aaPredicted RBP18.36■□□□□ 0.53
SNX25-204ENST00000506896 NRG3P56975 720 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 DCAF7P61962 342 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 EXOSC7Q15024 291 aaKnown RBP18.36■□□□□ 0.53
SNX25-204ENST00000506896 ZNF227Q86WZ6 799 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 FAM26EQ8N5C1 309 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 GOLM1Q8NBJ4 401 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 FAM98AQ8NCA5 519 aaKnown RBP18.36■□□□□ 0.53
SNX25-204ENST00000506896 KAT2AQ92830 837 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 ADIPOR1Q96A54 375 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 MAGEB18Q96M61 343 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 KLHL1Q9NR64 748 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 MAP10Q9P2G4 905 aa18.36■□□□□ 0.53
SNX25-204ENST00000506896 KLF13Q9Y2Y9 288 aaPredicted RBP18.36■□□□□ 0.53
SNX25-204ENST00000506896 USP9YO00507 2555 aaPredicted RBP18.35■□□□□ 0.53
SNX25-204ENST00000506896 CAPN14A8MX76 684 aa18.35■□□□□ 0.53
SNX25-204ENST00000506896 NME2P1O60361 137 aa18.35■□□□□ 0.53
SNX25-204ENST00000506896 COQ9O75208 318 aa18.35■□□□□ 0.53
SNX25-204ENST00000506896 CRYABP02511 175 aaKnown RBP18.35■□□□□ 0.53
SNX25-204ENST00000506896 NME2P22392 152 aa18.35■□□□□ 0.53
SNX25-204ENST00000506896 EMDP50402 254 aa18.35■□□□□ 0.53
SNX25-204ENST00000506896 ST13P50502 369 aaKnown RBP18.35■□□□□ 0.53
SNX25-204ENST00000506896 NR0B1P51843 470 aaKnown RBP18.35■□□□□ 0.53
SNX25-204ENST00000506896 CLDN8P56748 225 aa18.35■□□□□ 0.53
SNX25-204ENST00000506896 PSPHP78330 225 aa18.35■□□□□ 0.53
SNX25-204ENST00000506896 MRPL49Q13405 166 aaKnown RBP18.35■□□□□ 0.53
SNX25-204ENST00000506896 MAPKAPK3Q16644 382 aa18.35■□□□□ 0.53
SNX25-204ENST00000506896 CPTPQ5TA50 214 aa18.35■□□□□ 0.53
SNX25-204ENST00000506896 ANKRD26P1Q6NSI1 321 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms