RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SPANXN4Q5MJ08 99 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 LDLRAP1Q5SW96 308 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 ARSKQ6UWY0 536 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 Q6ZVQ6 151 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 CHMP1BQ7LBR1 199 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 BNIPLQ7Z465 357 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 YRDCQ86U90 279 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 RAB42Q8N4Z0 105 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 Q8N9P0 234 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 COLGALT1Q8NBJ5 622 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF540Q8NDQ6 660 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR6S1Q8NH40 331 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 C8orf46Q8TAG6 207 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 GPR148Q8TDV2 347 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF524Q96C55 264 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 DCPSQ96C86 337 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 VPS39Q96JC1 886 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 FICDQ9BVA6 458 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 PAPOLGQ9BWT3 736 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 CCSER1Q9C0I3 900 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 COQ10BQ9H8M1 238 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF556Q9HAH1 456 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 MYOZ2Q9NPC6 264 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 UBE2TQ9NPD8 197 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 SLC52A3Q9NQ40 469 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 GDF3Q9NR23 364 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 MED17Q9NVC6 651 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 IL20RAQ9UHF4 553 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 PLCL2Q9UPR0 1127 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 MGAT4BQ9UQ53 548 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 ENTPD4Q9Y227 616 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 WDR37Q9Y2I8 494 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 U3KQV3 271 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 NEDD4P46934 1319 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 WDR81Q562E7 1941 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 DLG5Q8TDM6 1919 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 HTTP42858 3142 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 NUP98P52948 1817 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 ANKRD36CQ5JPF3 1778 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 MED23Q9ULK4 1368 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 A0A087WZY1 265 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 CLRN2A0PK11 232 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 SRRM4A7MD48 611 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 PMS2P5A8MQ11 134 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 LMO7DNF2Z398 122 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM72CH0Y354 149 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 BLOC1S5-TXNDC5H3BN57 136 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 SURF4O15260 269 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 B4GAT1O43505 415 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 KRT86O43790 486 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 KIAA0513O60268 411 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 IGKV5-2P06315 115 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 UMODP07911 640 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 CD48P09326 243 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM200BP0CF97 657 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 PRSS56P0CW18 603 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 C4BPBP20851 252 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 GLRA1P23415 457 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 RPS12P25398 132 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 PRPHP41219 470 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 SLC6A8P48029 635 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 LEPRP48357 1165 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 LIMK2P53671 638 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 PAX9P55771 341 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 BACE1P56817 501 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 LINC01547P58512 204 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 NLRP11P59045 1033 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 RPS8P62241 208 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 KRT81Q14533 505 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 WSCD2Q2TBF2 565 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 CCDC152Q4G0S7 254 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 RIPPLY2Q5TAB7 128 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 DDI2Q5TDH0 399 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM72AQ5TYM5 149 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 C1orf189Q5VU69 101 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 LIPJQ5W064 366 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 CES4AQ5XG92 561 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 ARHGAP17Q68EM7 881 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM72DQ6L9T8 149 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 CDC42EP5Q6NZY7 148 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 Q71RC1 249 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 PTAR1Q7Z6K3 402 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 SMIM29Q86T20 159 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM72BQ86X60 149 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 HOGA1Q86XE5 327 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 CACUL1Q86Y37 369 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 MISPQ8IVT2 679 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 DND1Q8IYX4 353 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 SLC22A15Q8IZD6 547 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 CERS5Q8N5B7 392 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 BCORP1Q8N888 145 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 MINDY2Q8NBR6 621 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 GMCL1P1Q8NEA9 526 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 TRIM58Q8NG06 486 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR52B4Q8NGK2 314 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 GOLGA5Q8TBA6 731 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 SMAP2Q8WU79 429 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 SELENOMQ8WWX9 145 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 PHYHIPQ92561 330 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms