RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 PYGBP11216 843 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 CSNK2A2P19784 350 aaPredicted RBP13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 TAC1P20366 129 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 ATP5F1P24539 256 aaPredicted RBP13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 ABCD3P28288 659 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 DEKP35659 375 aaKnown RBP13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 CASP3P42574 277 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 TRA2BP62995 288 aaKnown RBP13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 TLE4Q04727 773 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 LTB4RQ15722 352 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 C1orf185Q5T7R7 199 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 HLA-DQA1Q5Y7H0 255 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 TMEM198Q66K66 360 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 SCIMPQ6UWF3 145 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 SH2D5Q6ZV89 423 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 CEP112Q8N8E3 955 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 NEIL3Q8TAT5 605 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 METTL6Q8TCB7 284 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 SARAFQ96BY9 339 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 ZNF382Q96SR6 550 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 RHOXF2Q9BQY4 288 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 BRINP2Q9C0B6 783 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 UBQLN3Q9H347 655 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 EXO5Q9H790 373 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 RYDENQ9NUL5 291 aaKnown RBP13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 QPCTLQ9NXS2 382 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 EMCNQ9ULC0 261 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 TIMM22Q9Y584 194 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 NINQ8N4C6 2090 aa13.19□□□□□ -0.3
CDC42SE2-209ENST00000506419 CCDC168Q8NDH2 2452 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 FIGNL2A6NMB9 653 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 CAPN14A8MX76 684 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 UBFD1O14562 309 aaKnown RBP13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 TP53I11O14683 189 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 WDR1O75083 606 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 GUCY1B2O75343 617 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 ULK1O75385 1050 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 NME6O75414 186 aaPredicted RBP13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 ATP1B1P05026 303 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 PCSK2P16519 638 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 MSX1P28360 303 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 EMDP50402 254 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 DLX5P56178 289 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 HMGCS1Q01581 520 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 RASA2Q15283 850 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 RPS6KA2Q15349 733 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 PRSS53Q2L4Q9 553 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 GPRIN3Q6ZVF9 776 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 DMRTC2Q8IXT2 367 aaPredicted RBP13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 ULK2Q8IYT8 1036 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 CCDC116Q8IYX3 515 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 VWA5B2Q8N398 1253 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 C17orf47Q8NEP4 570 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 OR52R1Q8NGF1 315 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 HGDQ93099 445 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 APIPQ96GX9 242 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 RILPQ96NA2 401 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 KCNA7Q96RP8 456 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 NODALQ96S42 347 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 SECISBP2Q96T21 854 aaKnown RBP13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 TIMP4Q99727 224 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 ITPAQ9BY32 194 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 ACPTQ9BZG2 426 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 ANKRA2Q9H9E1 313 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 MCCC2Q9HCC0 563 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 NMRK1Q9NWW6 199 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 BCAP29Q9UHQ4 241 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 PSME2Q9UL46 239 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 DLGAP4Q9Y2H0 992 aa13.18□□□□□ -0.3
CDC42SE2-209ENST00000506419 C2orf72A6NCS6 295 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 G3V2L1 256 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 KIF2AO00139 706 aaPredicted RBP13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 SNX4O95219 450 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 KRT6AP02538 564 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 KRT6BP04259 564 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 HPNP05981 417 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 IL3P08700 152 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 HOXD4P09016 255 aaPredicted RBP13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 HSD3B1P14060 373 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 HSD3B2P26439 372 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 GDF1P27539 372 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 PTGDSP41222 190 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 ZFP36L2P47974 494 aaKnown RBP13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 KRT6CP48668 564 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 ALDH9A1P49189 494 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 CDK9P50750 372 aaKnown RBP13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 FOXA1P55317 472 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 MRPS35P82673 323 aaKnown RBP13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 NNATQ16517 81 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 TBCELQ5QJ74 424 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 LCA5Q86VQ0 697 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 GSPT2Q8IYD1 628 aaKnown RBP13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 ACMSDQ8TDX5 336 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 C16orf78Q8WTQ4 265 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 KLHL29Q96CT2 875 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 L3HYPDHQ96EM0 354 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 C11orf24Q96F05 449 aaPredicted RBP13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 GSTO2Q9H4Y5 243 aa13.17□□□□□ -0.3
CDC42SE2-209ENST00000506419 FETUBQ9UGM5 382 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms