RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 DNAJB8Q8NHS0 232 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 TMEM125Q96AQ2 219 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 GLIPR2Q9H4G4 154 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 PFDN4Q9NQP4 134 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.46■□□□□ 0.23
SMN1-204ENST00000506163 NINQ8N4C6 2090 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 G3V3Y1 287 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 PEX1O43933 1283 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 FBXO45P0C2W1 286 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 CCL3P10147 92 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 EDN3P14138 238 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 RPL14P50914 215 aaKnown RBP16.45■□□□□ 0.22
SMN1-204ENST00000506163 PDCD2Q16342 344 aaPredicted RBP16.45■□□□□ 0.22
SMN1-204ENST00000506163 OPN5Q6U736 354 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 OR7G2Q8NG99 324 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 PPP1R36Q96LQ0 422 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 PPP3R2Q96LZ3 170 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 SH3GL2Q99962 352 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 C1orf50Q9BV19 199 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 ITPAQ9BY32 194 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 NXF5Q9H1B4 397 aaKnown RBP16.45■□□□□ 0.22
SMN1-204ENST00000506163 TSPAN10Q9H1Z9 355 aaPredicted RBP16.45■□□□□ 0.22
SMN1-204ENST00000506163 BCAP29Q9UHQ4 241 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 TMED5Q9Y3A6 229 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 LRRK2Q5S007 2527 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 SNNO75324 88 aaPredicted RBP16.45■□□□□ 0.22
SMN1-204ENST00000506163 SEMA7AO75326 666 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 SASH3O75995 380 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 CRYABP02511 175 aaKnown RBP16.45■□□□□ 0.22
SMN1-204ENST00000506163 MEOX1P50221 254 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 KCNK10P57789 538 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 PDE7AQ13946 482 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 RTL4Q6ZR62 310 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 SAMD14Q8IZD0 417 aaPredicted RBP16.45■□□□□ 0.22
SMN1-204ENST00000506163 SLC15A4Q8N697 577 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 PRR7Q8TB68 274 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 TP53INP1Q96A56 240 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 CIDECQ96AQ7 238 aaPredicted RBP16.45■□□□□ 0.22
SMN1-204ENST00000506163 SPACA9Q96E40 222 aaPredicted RBP16.45■□□□□ 0.22
SMN1-204ENST00000506163 AMDHD1Q96NU7 426 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 BBS4Q96RK4 519 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 REEP4Q9H6H4 257 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 PROK2Q9HC23 129 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 TIMMDC1Q9NPL8 285 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 MIEF1Q9NQG6 463 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 ENTPD4Q9Y227 616 aa16.45■□□□□ 0.22
SMN1-204ENST00000506163 KLF13Q9Y2Y9 288 aaPredicted RBP16.45■□□□□ 0.22
SMN1-204ENST00000506163 DOPEY2Q9Y3R5 2298 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 ZNHIT1O43257 154 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 MPIP34949 423 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 NCBP2P52298 156 aaKnown RBP eCLIP16.44■□□□□ 0.22
SMN1-204ENST00000506163 PTGR1Q14914 329 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 NNATQ16517 81 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 ATP6AP1LQ52LC2 224 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 C6orf163Q5TEZ5 329 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 IL23RQ5VWK5 629 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 DESI1Q6ICB0 168 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 HDXQ7Z353 690 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 HOMEZQ8IX15 550 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 PRR22Q8IZ63 422 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 FAM9CQ8IZT9 166 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 LIX1Q8N485 282 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 ZFP62Q8NB50 900 aaPredicted RBP16.44■□□□□ 0.22
SMN1-204ENST00000506163 OR10G3Q8NGC4 313 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 SLC22A8Q8TCC7 542 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 TUBGCP3Q96CW5 907 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 ATP6V1G3Q96LB4 118 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 AKTIPQ9H8T0 292 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 GIMAP4Q9NUV9 329 aa16.44■□□□□ 0.22
SMN1-204ENST00000506163 CHCHD2Q9Y6H1 151 aaPredicted RBP16.44■□□□□ 0.22
SMN1-204ENST00000506163 NPIPA5E9PKD4 350 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 PLOD3O60568 738 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 TBX19O60806 448 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 RNF224P0DH78 156 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 PIGAP37287 484 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 ALDH6A1Q02252 535 aaKnown RBP16.43■□□□□ 0.22
SMN1-204ENST00000506163 ZNF551Q7Z340 670 aaPredicted RBP16.43■□□□□ 0.22
SMN1-204ENST00000506163 CHERPQ8IWX8 916 aaKnown RBP16.43■□□□□ 0.22
SMN1-204ENST00000506163 FNDC5Q8NAU1 212 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 GOLM1Q8NBJ4 401 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 C17orf47Q8NEP4 570 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 OR5M3Q8NGP4 307 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 PAQR8Q8TEZ7 354 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 SGCZQ96LD1 299 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 THAP1Q9NVV9 213 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 NKIRAS1Q9NYS0 192 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 NPIPA1Q9UND3 350 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 NPFFR2Q9Y5X5 522 aa16.43■□□□□ 0.22
SMN1-204ENST00000506163 NUP214P35658 2090 aaPredicted RBP16.42■□□□□ 0.22
SMN1-204ENST00000506163 KLRC4-KLRK1H3BQV0 150 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 UNC5CO95185 931 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 EFNA1P20827 205 aaPredicted RBP16.42■□□□□ 0.22
SMN1-204ENST00000506163 CNR1P21554 472 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 MC3RP41968 323 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 FRKP42685 505 aaPredicted RBP16.42■□□□□ 0.22
SMN1-204ENST00000506163 DNASE1L1P49184 302 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 FBXW4P57775 412 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 FOXO1Q12778 655 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 NTRK2Q16620 822 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 HLA-DQA1Q5Y7H0 255 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms