RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 NUDT8Q8WV74 236 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 KAT2AQ92830 837 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 CHMP6Q96FZ7 201 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 TEX37Q96LM6 180 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 DUSP26Q9BV47 211 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 RNF32Q9H0A6 362 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 OR10A5Q9H207 317 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 CDCP1Q9H5V8 836 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 EPS8L2Q9H6S3 715 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 STMN3Q9NZ72 180 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 ZIM2Q9NZV7 527 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 MYOTQ9UBF9 498 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 CFL2Q9Y281 166 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 TP53TG5Q9Y2B4 290 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 SVILO95425 2214 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 SPTA1P02549 2419 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 A0A0G2JND7 137 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 A0A1W2PRB8 838 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 PRAMEF2O60811 474 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 SLC22A3O75751 556 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 PDGFAP04085 211 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 IL12AP29459 219 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 KIR3DL1P43629 444 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 ATP4BP51164 291 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 WNT3P56703 355 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 MRPS35P82673 323 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 GTF3C1Q12789 2109 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 DUSP8Q13202 625 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 LY6DQ14210 128 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 EXOSC7Q15024 291 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 EBPQ15125 230 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 OR4F3Q6IEY1 312 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 LINC00696Q6ZRV3 163 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 ASB18Q6ZVZ8 466 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 SLC29A4Q7RTT9 530 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 ZGRF1Q86YA3 2104 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 MIER2Q8N344 545 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 OR7G2Q8NG99 324 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 PSMA8Q8TAA3 256 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 THAP3Q8WTV1 239 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 OR5P2Q8WZ92 322 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 TM9SF4Q92544 642 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 HAS2Q92819 552 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 ELP4Q96EB1 424 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 MARK4Q96L34 752 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 RILPQ96NA2 401 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 ZBTB18Q99592 522 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 SLC25A18Q9H1K4 315 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 ZBTB20Q9HC78 741 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 TMEM45AQ9NWC5 275 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 NTMQ9P121 344 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 KLHL14Q9P2G3 628 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 BCAP29Q9UHQ4 241 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 C19orf53Q9UNZ5 99 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 TRIM33Q9UPN9 1127 aa11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 YARS2Q9Y2Z4 477 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-208ENST00000504489 PRSS51A0A1B0GVH4 220 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 C2orf92A0A1B0GVN3 265 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 GMNCA6NCL1 334 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 RNASET2O00584 256 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 FCHO1O14526 889 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 MAN1A2O60476 641 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 DPM1O60762 260 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 SCN2BO60939 215 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 EFNA1P20827 205 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 GPX3P22352 226 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 S100A3P33764 101 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 GPC1P35052 558 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 MC3RP41968 323 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 EMDP50402 254 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 ARFIP2P53365 341 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 NME5P56597 212 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 STX1BP61266 288 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 PHC1P78364 1004 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 HSPB3Q12988 150 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 FAM174BQ3ZCQ3 159 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 PIGGQ5H8A4 983 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 SPANXN4Q5MJ08 99 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 ANXA8L1Q5VT79 327 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 TMEM107Q6UX40 140 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 LIAT1Q6ZQX7 453 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 BEST3Q8N1M1 668 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 OR2L13Q8N349 312 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 ZADH2Q8N4Q0 377 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 SLC15A4Q8N697 577 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 SIMC1Q8NDZ2 872 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 C17orf47Q8NEP4 570 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 VPS37AQ8NEZ2 397 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 OR52R1Q8NGF1 315 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 C16orf52Q8NHV5 167 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 ADIPOR1Q96A54 375 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 TP53INP1Q96A56 240 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 TMEM120AQ9BXJ8 343 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 WWTR1Q9GZV5 400 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 ZNF71Q9NQZ8 489 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 SIRT3Q9NTG7 399 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 FAM120CQ9NX05 1096 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 TAS2R9Q9NYW1 312 aa11.03□□□□□ -0.64
PDLIM5-208ENST00000504489 ABI3Q9P2A4 366 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms