RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 DRGXA6NNA5 263 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 KDELR3O43731 214 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 IGHA2P01877 340 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MRPL3P09001 348 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 OSMP13725 252 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 CTRB1P17538 263 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 IL1RNP18510 177 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 CR2P20023 1033 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SHC1P29353 583 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 BUD31P41223 144 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 FNTBP49356 437 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 STXBP1P61764 594 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 TEAD4Q15561 434 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SYT14P1Q58G82 188 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 CTRB2Q6GPI1 263 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF613Q6PF04 617 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ARL9Q6T311 187 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF782Q6ZMW2 699 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 THOC6Q86W42 341 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SERPINA12Q8IW75 414 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MS4A15Q8N5U1 240 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 BBS1Q8NFJ9 593 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 EXOSC8Q96B26 276 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SLC22A12Q96S37 553 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 DDOQ99489 341 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MAPKAP1Q9BPZ7 522 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 WRAP53Q9BUR4 548 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 RSPO3Q9BXY4 272 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SPNS1Q9H2V7 528 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SERHL2Q9H4I8 314 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 BRD9Q9H8M2 597 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MED20Q9H944 212 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ZFP64Q9NPA5 681 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 CDH10Q9Y6N8 788 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 A0A1W2PRG6 482 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 CPSF4LA6NMK7 179 aaKnown RBP7.21□□□□□ -1.26
NEDD9-208ENST00000504387 SLC28A2O43868 658 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 CLDN11O75508 207 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 RAB36O95755 333 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 SLC16A8O95907 504 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 CD160O95971 181 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 DHFRP00374 187 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 IL1AP01583 271 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 F11P03951 625 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 URODP06132 367 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 EIF4EP06730 217 aaKnown RBP7.21□□□□□ -1.26
NEDD9-208ENST00000504387 CKBP12277 381 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 M6PRP20645 277 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 PCGF2P35227 344 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 ACVR1BP36896 505 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 XCR1P46094 333 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 PFN3P60673 137 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 UBE2MP61081 183 aaKnown RBP7.21□□□□□ -1.26
NEDD9-208ENST00000504387 RAE1P78406 368 aaKnown RBP7.21□□□□□ -1.26
NEDD9-208ENST00000504387 ZNF628Q5EBL2 1059 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 NDUFAF5Q5TEU4 345 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 FCRLBQ6BAA4 426 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 TRIM40Q6P9F5 258 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 TRILQ7L0X0 811 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 FBXO22Q8NEZ5 403 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 OR51G2Q8NGK0 314 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 SLC5A11Q8WWX8 675 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 ATF6BQ99941 703 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 OR51J1Q9H342 316 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 ELAC1Q9H777 363 aaKnown RBP7.21□□□□□ -1.26
NEDD9-208ENST00000504387 PPP1R3EQ9H7J1 279 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 ISG20L2Q9H9L3 353 aaKnown RBP7.21□□□□□ -1.26
NEDD9-208ENST00000504387 CNOT2Q9NZN8 540 aaKnown RBP7.21□□□□□ -1.26
NEDD9-208ENST00000504387 SEC14L3Q9UDX4 400 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 SH2B3Q9UQQ2 575 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 RUVBL1Q9Y265 456 aaKnown RBP7.21□□□□□ -1.26
NEDD9-208ENST00000504387 NTNG1Q9Y2I2 539 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 A0A1W2PPL8 197 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 A0A1W2PRB8 838 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 C1orf226A1L170 272 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 M0R233 179 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 HPXP02790 462 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 UCHL1P09936 223 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 TRAPPC2P0DI81 140 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 TRAPPC2BP0DI82 140 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 NAGAP17050 411 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 NUDT1P36639 197 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 TALDO1P37837 337 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 EVX1P49640 407 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 SELENOPP49908 381 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 CDH4P55283 916 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 WNT4P56705 351 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 B4GALNT1Q00973 533 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 DEFA5Q01523 94 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 TEKQ02763 1124 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.21□□□□□ -1.26
NEDD9-208ENST00000504387 MLLT11Q13015 90 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-208ENST00000504387 GRIN2CQ14957 1233 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 GRK1Q15835 563 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 SYPL1Q16563 259 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 TCTN3Q6NUS6 607 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 FAM122CQ6P4D5 195 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 PODNL1Q6PEZ8 512 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 RPTNQ6XPR3 784 aa7.21□□□□□ -1.26
NEDD9-208ENST00000504387 PRSS42Q7Z5A4 293 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms