RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SSTR2P30874 369 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 ALDH9A1P49189 494 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 WNT3P56703 355 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 RAE1P78406 368 aaKnown RBP14.9□□□□□ -0.02
SCLT1-204ENST00000503215 TLE4Q04727 773 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 SLC29A2Q14542 456 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 TRMT12Q53H54 448 aaKnown RBP14.9□□□□□ -0.02
SCLT1-204ENST00000503215 LGSNQ5TDP6 509 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 SCIMPQ6UWF3 145 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 B3GNT6Q6ZMB0 384 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 GPRIN3Q6ZVF9 776 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 SEM1Q6ZVN7 128 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 ACAD11Q709F0 780 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 IFT20Q8IY31 132 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 DND1Q8IYX4 353 aaKnown RBP14.9□□□□□ -0.02
SCLT1-204ENST00000503215 KIF18AQ8NI77 898 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 ZNF681Q96N22 645 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 RILPQ96NA2 401 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 GNRHR2Q96P88 292 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 KCNA7Q96RP8 456 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 ZNF382Q96SR6 550 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 BRINP2Q9C0B6 783 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 BRF2Q9HAW0 419 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 KCNJ16Q9NPI9 418 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 VPS29Q9UBQ0 182 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 ZNF639Q9UID6 485 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 EMCNQ9ULC0 261 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 TIMM22Q9Y584 194 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 C1orf226A1L170 272 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 ANKRD33BA6NCL7 494 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 FIGNL2A6NMB9 653 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 CBX7O95931 251 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 PCSK2P16519 638 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 CSNK2A2P19784 350 aaPredicted RBP14.89□□□□□ -0.03
SCLT1-204ENST00000503215 IMPDH1P20839 514 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 ATP5F1P24539 256 aaPredicted RBP14.89□□□□□ -0.03
SCLT1-204ENST00000503215 ELAVL4P26378 380 aaKnown RBP14.89□□□□□ -0.03
SCLT1-204ENST00000503215 ABCD3P28288 659 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 PRKAA2P54646 552 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 MRPS35P82673 323 aaKnown RBP14.89□□□□□ -0.03
SCLT1-204ENST00000503215 HMGCS1Q01581 520 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 MAP4K2Q12851 820 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 RPS6KA2Q15349 733 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 C1orf185Q5T7R7 199 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 WLSQ5T9L3 541 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 VWA5B2Q8N398 1253 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 OR7G1Q8NGA0 311 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 NEIL3Q8TAT5 605 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 SARAFQ96BY9 339 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 KLHL29Q96CT2 875 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 NTNG2Q96CW9 530 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 MTBPQ96DY7 904 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 C14orf79Q96F83 325 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 APIPQ96GX9 242 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 ITPAQ9BY32 194 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 ANGPTL4Q9BY76 406 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 ACPTQ9BZG2 426 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 ACKR4Q9NPB9 350 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 TBK1Q9UHD2 729 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 BCAP29Q9UHQ4 241 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 SPG11Q96JI7 2443 aa14.89□□□□□ -0.03
SCLT1-204ENST00000503215 C2orf72A6NCS6 295 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 UBFD1O14562 309 aaKnown RBP14.88□□□□□ -0.03
SCLT1-204ENST00000503215 TRAPPC6AO75865 159 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 ATP1B1P05026 303 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 ABCB1P08183 1280 aaPredicted RBP14.88□□□□□ -0.03
SCLT1-204ENST00000503215 TAC1P20366 129 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 GDF1P27539 372 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 MSX1P28360 303 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 CASP3P42574 277 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 DLX5P56178 289 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 RASA2Q15283 850 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 PRSS53Q2L4Q9 553 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 CEP112Q8N8E3 955 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 OR52R1Q8NGF1 315 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 METTL6Q8TCB7 284 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 CTHRC1Q96CG8 243 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 ZNF597Q96LX8 424 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 NODALQ96S42 347 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 EHD3Q9NZN3 535 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 ITGB1BP2Q9UKP3 347 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 DLGAP4Q9Y2H0 992 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 PLLPQ9Y342 182 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 SLC6A5Q9Y345 797 aa14.88□□□□□ -0.03
SCLT1-204ENST00000503215 KIF2AO00139 706 aaPredicted RBP14.87□□□□□ -0.03
SCLT1-204ENST00000503215 TP53I11O14683 189 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 WDR1O75083 606 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 GUCY1B2O75343 617 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 KRT6AP02538 564 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 KRT6BP04259 564 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 SHBGP04278 402 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 IL3P08700 152 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 KRT6CP48668 564 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 EMDP50402 254 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 FOXA1P55317 472 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 BTKQ06187 659 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 SNTB1Q13884 538 aaKnown RBP14.87□□□□□ -0.03
SCLT1-204ENST00000503215 EIPR1Q53HC9 387 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 TMEM198Q66K66 360 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 SH2D5Q6ZV89 423 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms