RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PWWP2BQ6NUJ5 590 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 NEPROQ6NW34 567 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 GPR142Q7Z601 462 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 GPBP1Q86WP2 473 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 TBC1D10CQ8IV04 446 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 STKLD1Q8NE28 680 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 WDR36Q8NI36 951 aaKnown RBP4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 CAPNS2Q96L46 248 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 OVOL2Q9BRP0 275 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 ERVK-6Q9BXR3 956 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 PLEKHA3Q9HB20 300 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 SDF2L1Q9HCN8 221 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 ATAD3AQ9NVI7 634 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 EXTL2Q9UBQ6 330 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 XPO7Q9UIA9 1087 aaKnown RBP4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 MRPS18CQ9Y3D5 142 aaKnown RBP4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 DNMT1P26358 1616 aaKnown RBP4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 RTEL1-TNFRSF6BF6WH68 1400 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 PTPRKQ15262 1439 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 ARHGEF5Q12774 1597 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 CEP170BQ9Y4F5 1589 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 CEP152O94986 1710 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 RNF222A6NCQ9 220 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 TMCO5BA8MYB1 307 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 GPR89AB7ZAQ6 455 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 CFLARO15519 480 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 KCNAB3O43448 404 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 GMFGO60234 142 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 OR4F21O95013 312 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 NXPH2O95156 264 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 GSTA1P08263 222 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 GPR89BP0CG08 455 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 HNRNPA2B1P22626 353 aaKnown RBP4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 AXLP30530 894 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 MAT2AP31153 395 aaKnown RBP4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 RPL9P32969 192 aaKnown RBP4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 MMP12P39900 470 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 PTGFRP43088 359 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 SGSHP51688 502 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 NAAAQ02083 359 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 NFATC2Q13469 925 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 FAM189A2Q15884 450 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 HAGHQ16775 308 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 PARP6Q2NL67 630 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 USH1GQ495M9 461 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZNF876PQ49A33 203 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 NADK2Q4G0N4 442 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 WLSQ5T9L3 541 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 BHLHB9Q6PI77 547 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 PAQR9Q6ZVX9 377 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 TMEM110Q86TL2 294 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 ICA1LQ8NDH6 482 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 OR2T34Q8NGX1 318 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 FBXO25Q8TCJ0 367 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZNF606Q8WXB4 792 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 PNPLA2Q96AD5 504 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZNF501Q96CX3 271 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 ALKBH3Q96Q83 286 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 RBM24Q9BX46 236 aaKnown RBP4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 DGCR6LQ9BY27 220 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 WDR13Q9H1Z4 485 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 MED20Q9H944 212 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 WDR76Q9H967 626 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 NMUR1Q9HB89 426 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 B3GAT2Q9NPZ5 323 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 TUBGCP4Q9UGJ1 667 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 BAIAP2L1Q9UHR4 511 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 ATP6V1HQ9UI12 483 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 SNX6Q9UNH7 406 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 PYGO1Q9Y3Y4 419 aa4.51□□□□□ -1.69
HMGB1P3-201ENST00000502802 RNF17Q9BXT8 1623 aaKnown RBP4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 CCDC141Q6ZP82 1450 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 SYNJ2BP-COX16A0A087WUM0 186 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 MEIOCA2RUB1 952 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 ERVV-2B6SEH9 535 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 NEDD8-MDP1E9PL57 170 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 K7EQD1 137 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 MCF2LO15068 1137 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 CLDN1O95832 211 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 ASNSP08243 561 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 FCGR2CP31995 323 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 ID1P41134 155 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 CRYBA2P53672 197 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 ERVK-16P61578 105 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 CYCSP99999 105 aaKnown RBP4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 SNTB2Q13425 540 aaKnown RBP4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 ITPK1Q13572 414 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 TRIP10Q15642 601 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZKSCAN8Q15776 578 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 ADAMTSL4-AS1Q5T5F5 129 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 RHBDD2Q6NTF9 364 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 NIPAL3Q6P499 406 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 CES3Q6UWW8 571 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 Q6ZRP5 223 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 RGS9BPQ6ZS82 235 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 RANBP3LQ86VV4 465 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 CBWD2Q8IUF1 395 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 PYROXD2Q8N2H3 581 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 OR10G7Q8NGN6 311 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 SLCO2A1Q92959 643 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms