RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 NEURL1O76050 574 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 NADKO95544 446 aaPredicted RBP23.25■■□□□ 1.31
LSM6-202ENST00000502781 GPX3P22352 226 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 CASRP41180 1078 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 IDH3AP50213 366 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 EMDP50402 254 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 ST13P50502 369 aaKnown RBP23.25■■□□□ 1.31
LSM6-202ENST00000502781 GUCY1A3Q02108 690 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 ZNF169Q14929 603 aaPredicted RBP23.25■■□□□ 1.31
LSM6-202ENST00000502781 ZNF551Q7Z340 670 aaPredicted RBP23.25■■□□□ 1.31
LSM6-202ENST00000502781 OR52R1Q8NGF1 315 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 STON2Q8WXE9 905 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 TP53INP1Q96A56 240 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 SIGLEC12Q96PQ1 595 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 DPY30Q9C005 99 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 ANKRA2Q9H9E1 313 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 ATAD3AQ9NVI7 634 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 ANKRD10Q9NXR5 420 aa23.25■■□□□ 1.31
LSM6-202ENST00000502781 C2orf92A0A1B0GVN3 265 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 PSMG1O95456 288 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 CYB561P49447 251 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 SSR4P51571 173 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 NXNQ6DKJ4 435 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 OR2L13Q8N349 312 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 SLC15A4Q8N697 577 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 ZFP28Q8NHY6 868 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 TESCQ96BS2 214 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 ELP4Q96EB1 424 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 EBF4Q9BQW3 602 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 BHLHE41Q9C0J9 482 aaPredicted RBP23.24■■□□□ 1.31
LSM6-202ENST00000502781 BCAP29Q9UHQ4 241 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 C19orf53Q9UNZ5 99 aaPredicted RBP23.24■■□□□ 1.31
LSM6-202ENST00000502781 PCDHGB6Q9Y5F9 930 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 PCDHGA10Q9Y5H3 936 aa23.24■■□□□ 1.31
LSM6-202ENST00000502781 MDH1P40925 334 aaKnown RBP23.23■■□□□ 1.31
LSM6-202ENST00000502781 MC3RP41968 323 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 AQP5P55064 265 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 OR1C1Q15619 314 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 COLEC12Q5KU26 742 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 TMEM198Q66K66 360 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 LYPD8Q6UX82 237 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 GPALPP1Q8IXQ4 340 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 TMEM156Q8N614 296 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 OR8J2Q8NGG1 315 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 GAL3ST4Q96RP7 486 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.23■■□□□ 1.31
LSM6-202ENST00000502781 TCF7L2Q9NQB0 619 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 LRFN1Q9P244 771 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 PRODH2Q9UF12 536 aa23.23■■□□□ 1.31
LSM6-202ENST00000502781 ZNF462Q96JM2 2506 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 UPK1AO00322 258 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 IDO1P14902 403 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 SOX3P41225 446 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 MANFP55145 182 aaKnown RBP23.22■■□□□ 1.31
LSM6-202ENST00000502781 OC90Q02509 493 aaPredicted RBP23.22■■□□□ 1.31
LSM6-202ENST00000502781 HSPB3Q12988 150 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 SPINK14Q6IE38 97 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 RPUSD3Q6P087 351 aaKnown RBP23.22■■□□□ 1.31
LSM6-202ENST00000502781 TMEM107Q6UX40 140 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 ACAD11Q709F0 780 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 PSMA8Q8TAA3 256 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 TEX37Q96LM6 180 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 CCDC28BQ9BUN5 200 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 DUSP26Q9BV47 211 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 CLMPQ9H6B4 373 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 NTMQ9P121 344 aa23.22■■□□□ 1.31
LSM6-202ENST00000502781 HEMK1Q9Y5R4 338 aaPredicted RBP23.22■■□□□ 1.31
LSM6-202ENST00000502781 UBDO15205 165 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 SCN2BO60939 215 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 OR6B1O95007 311 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 CLNS1AP54105 237 aaKnown RBP23.21■■□□□ 1.31
LSM6-202ENST00000502781 WNT3P56703 355 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 UFM1P61960 85 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 SRSF11Q05519 484 aaKnown RBP23.21■■□□□ 1.31
LSM6-202ENST00000502781 C19orf57Q0VDD7 668 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 GSTA3Q16772 222 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 DPY19L1Q2PZI1 675 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 PDCD4Q53EL6 469 aaKnown RBP23.21■■□□□ 1.31
LSM6-202ENST00000502781 HLA-DQA1Q5Y7H0 255 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 OPN5Q6U736 354 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 HORMAD2Q8N7B1 307 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 SLC22A8Q8TCC7 542 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 SCMH1Q96GD3 660 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 VSTM2LQ96N03 204 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 SIKE1Q9BRV8 207 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 ITPAQ9BY32 194 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 SDR39U1Q9NRG7 319 aaPredicted RBP23.21■■□□□ 1.31
LSM6-202ENST00000502781 LUZP4Q9P127 313 aa23.21■■□□□ 1.31
LSM6-202ENST00000502781 A0A1W2PRB8 838 aa23.2■■□□□ 1.3
LSM6-202ENST00000502781 POLR3GO15318 223 aaPredicted RBP23.2■■□□□ 1.3
LSM6-202ENST00000502781 PPICP45877 212 aa23.2■■□□□ 1.3
LSM6-202ENST00000502781 CDK9P50750 372 aaKnown RBP23.2■■□□□ 1.3
LSM6-202ENST00000502781 ZNF791Q3KP31 576 aaPredicted RBP23.2■■□□□ 1.3
LSM6-202ENST00000502781 CYP4Z2PQ8N1L4 340 aa23.2■■□□□ 1.3
LSM6-202ENST00000502781 ASB15Q8WXK1 588 aa23.2■■□□□ 1.3
LSM6-202ENST00000502781 OR5P2Q8WZ92 322 aa23.2■■□□□ 1.3
LSM6-202ENST00000502781 BTBD9Q96Q07 612 aa23.2■■□□□ 1.3
LSM6-202ENST00000502781 NXF5Q9H1B4 397 aaKnown RBP23.2■■□□□ 1.3
LSM6-202ENST00000502781 SIRT3Q9NTG7 399 aaPredicted RBP23.2■■□□□ 1.3
LSM6-202ENST00000502781 TAS2R9Q9NYW1 312 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms