RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 IGHV3-20A0A0C4DH32 117 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 IGHV3-38A0A0C4DH36 116 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 TTC26A0AVF1 554 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 C5orf52A6NGY3 159 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 SIX3O95343 332 aaPredicted RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 PGK1P00558 417 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 MT-ND2P03891 347 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 GYPCP04921 128 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 ASNSP08243 561 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 CCDC192P0DO97 292 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 GOT1P17174 413 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 LBPP18428 481 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 GLRA2P23416 452 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 CCNE1P24864 410 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 RPS12P25398 132 aaKnown RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 GIFP27352 417 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 PKLRP30613 574 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 HOXC13P31276 330 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 TIA1P31483 386 aaKnown RBP eCLIP2.32□□□□□ -2.044e-6■■■□□ 17.7
RIF1-212ENST00000498041 COPB2P35606 906 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 GP5P40197 560 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 PRKCIP41743 596 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 NDST2P52849 883 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 PEX3P56589 373 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 ARHGAP1Q07960 439 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 COX10Q12887 443 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 RIGQ13278 110 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 KIAA0141Q14154 515 aaPredicted RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 GRB14Q14449 540 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 GPNMBQ14956 572 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 PSMD6Q15008 389 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 ZNF146Q15072 292 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 PPA1Q15181 289 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 SYCP1Q15431 976 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 ZNF239Q16600 458 aaKnown RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 ZCWPW2Q504Y3 356 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 CEP55Q53EZ4 464 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 ZNF542PQ5EBM4 170 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 HERC4Q5GLZ8 1057 aaPredicted RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 SPANXN4Q5MJ08 99 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 MARCH8Q5T0T0 291 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 FAM46CQ5VWP2 391 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 FAM219BQ5XKK7 198 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 TRAT1Q6PIZ9 186 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 TMEM182Q6ZP80 229 aaPredicted RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 USP50Q70EL3 339 aaPredicted RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 ARMCX2Q7L311 632 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 TRMT11Q7Z4G4 463 aaKnown RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 GPR142Q7Z601 462 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 C5orf24Q7Z6I8 188 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 METTL23Q86XA0 190 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 ERO1BQ86YB8 467 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 APOBEC3FQ8IUX4 373 aaKnown RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 VSTM4Q8IW00 320 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 PHC2Q8IXK0 858 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 THNSL1Q8IYQ7 743 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 TEX26Q8N6G2 289 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 OR9Q2Q8NGE9 314 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 OR5B17Q8NGF7 314 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 KIAA1524Q8TCG1 905 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 RIT1Q92963 219 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 ERO1AQ96HE7 468 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 MS4A14Q96JA4 679 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 CNOT6LQ96LI5 555 aaKnown RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 TSSK2Q96PF2 358 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 ATF6BQ99941 703 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 LZTS2Q9BRK4 669 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 LXNQ9BS40 222 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 CHCHD5Q9BSY4 110 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 PAPOLGQ9BWT3 736 aaKnown RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 EDEM3Q9BZQ6 932 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 TRIM7Q9C029 511 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 POLR3FQ9H1D9 316 aaPredicted RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 HEXA-AS1Q9H8Q6 139 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 SLC7A10Q9NS82 523 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 GTSE1Q9NYZ3 720 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.32□□□□□ -2.04
RIF1-212ENST00000498041 PLCL2Q9UPR0 1127 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 SATB2Q9UPW6 733 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 NCKAP1Q9Y2A7 1128 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 MRPL11Q9Y3B7 192 aaKnown RBP2.32□□□□□ -2.04
RIF1-212ENST00000498041 MYO3BQ8WXR4 1341 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 PTPRSQ13332 1948 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 CITO14578 2027 aa2.32□□□□□ -2.04
RIF1-212ENST00000498041 A0A0B4J203 849 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 ACOD1A6NK06 481 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 SHISA7A6NL88 538 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 CCDC169A6NNP5 214 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 C19orf81C9J6K1 198 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 I3L4J1 428 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 PGRMC2O15173 223 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 TNFSF12O43508 249 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 BUB1O43683 1085 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 TBCAO75347 108 aaKnown RBP2.31□□□□□ -2.04
RIF1-212ENST00000498041 PTMAP06454 111 aaKnown RBP2.31□□□□□ -2.04
RIF1-212ENST00000498041 ANKRD34CP0C6C1 535 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 SUPT20HL2P0C7V6 817 aa2.31□□□□□ -2.04
RIF1-212ENST00000498041 SP9P0CG40 484 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms