RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 GSCP56915 257 aaPredicted RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 KRTAP12-2P59991 146 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 RPS27AP62979 156 aaKnown RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 HSF2Q03933 536 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 GABPB1Q06547 395 aaPredicted RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 HSPA14Q0VDF9 509 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 CALCOCO2Q13137 446 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 CUL2Q13617 745 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 DDX39BQ13838 428 aaKnown RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 PDIA5Q14554 519 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 MXD4Q14582 209 aaPredicted RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 MLF2Q15773 248 aaPredicted RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 KNOP1Q1ED39 458 aaKnown RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 SHROOM1Q2M3G4 852 aaPredicted RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 LIPKQ5VXJ0 399 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 LRRC8BQ6P9F7 803 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 ANGPTL8Q6UXH0 198 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 Q6ZRG5 221 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 OTUD6AQ7L8S5 288 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 CARM1Q86X55 608 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 MISPQ8IVT2 679 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 CDH26Q8IXH8 852 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 ZNF679Q8IYX0 411 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 CERS5Q8N5B7 392 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 BANPQ8N9N5 519 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 ZNRF1Q8ND25 227 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 OR52B4Q8NGK2 314 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 OR6M1Q8NGM8 313 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 COG3Q96JB2 828 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 NSMCE3Q96MG7 304 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 PRICKLE1Q96MT3 831 aaPredicted RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 ZNF599Q96NL3 588 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 KRT12Q99456 494 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 COQ7Q99807 217 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 SYT15Q9BQS2 421 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 PINK1Q9BXM7 581 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 PUS3Q9BZE2 481 aaKnown RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 RAB33BQ9H082 229 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 TMEM231Q9H6L2 316 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 NLGN3Q9NZ94 848 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 CNOT2Q9NZN8 540 aaKnown RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 PTBP2Q9UKA9 531 aaKnown RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 CHMP2BQ9UQN3 213 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 MRPS2Q9Y399 296 aaKnown RBP3.08□□□□□ -1.92
CLK1-214ENST00000496205 MFHAS1Q9Y4C4 1052 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 ZMYM6O95789 1325 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 KIF16BQ96L93 1317 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 NSD2O96028 1365 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 ZSCAN5CA6NGD5 496 aaPredicted RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 H0YIV9 168 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 K7EQG2 157 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 L7N2F9 121 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 CHEK1O14757 476 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 CHADO15335 359 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 SNAP91O60641 907 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 MTX2O75431 263 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 ANXA9O76027 345 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 SYNGR4O95473 234 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 EPB41P11171 864 aaKnown RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 MAT2AP31153 395 aaKnown RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 STIP1P31948 543 aaKnown RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 NDST2P52849 883 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 PEX3P56589 373 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 CYCSP99999 105 aaKnown RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 BEX3Q00994 111 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 ZNF177Q13360 481 aaPredicted RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 SLC17A1Q14916 467 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 NECTIN1Q15223 517 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 ZMYND11Q15326 602 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 P2RY14Q15391 338 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 CARTPTQ16568 116 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 RFTN2Q52LD8 501 aaPredicted RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 MPPE1Q53F39 396 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 HSP90AB3PQ58FF7 597 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 LDLRAP1Q5SW96 308 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 ZC2HC1BQ5TFG8 222 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 CDC42EP5Q6NZY7 148 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 METAP1DQ6UB28 335 aaPredicted RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 C3P1Q6ZMU1 363 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 GDPGP1Q6ZNW5 385 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 CDHR3Q6ZTQ4 885 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 TMEM26Q6ZUK4 368 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 C17orf64Q86WR6 236 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 ZNF614Q8N883 585 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 BCORP1Q8N888 145 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 EIF1ADQ8N9N8 165 aaKnown RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 MINDY2Q8NBR6 621 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 CHDHQ8NE62 594 aaPredicted RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 GIMAP1Q8WWP7 306 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 SELENOMQ8WWX9 145 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 PINX1Q96BK5 328 aaKnown RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 USP28Q96RU2 1077 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 CCDC77Q9BR77 488 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 ZSCAN5AQ9BUG6 496 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 GCOM2Q9BZD3 368 aaPredicted RBP3.07□□□□□ -1.92
CLK1-214ENST00000496205 PARLQ9H300 379 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 MARCH7Q9H992 704 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 GDF3Q9NR23 364 aa3.07□□□□□ -1.92
CLK1-214ENST00000496205 ZNF446Q9NWS9 450 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms