RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 ITPAQ9BY32 194 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 GLIPR2Q9H4G4 154 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 HAO1Q9UJM8 370 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 WBP11Q9Y2W2 641 aaKnown RBP9.09□□□□□ -0.95
CALD1-223ENST00000496024 TENM4Q6N022 2769 aa9.09□□□□□ -0.95
CALD1-223ENST00000496024 NME2P1O60361 137 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 VPS4BO75351 444 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 NADKO95544 446 aaPredicted RBP9.08□□□□□ -0.96
CALD1-223ENST00000496024 PRPS2P11908 318 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 NME2P22392 152 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 GPC1P35052 558 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 SOX18P35713 384 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 RFC3P40938 356 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 MC3RP41968 323 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 EMX2Q04743 252 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 HSPB3Q12988 150 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 MRPL49Q13405 166 aaKnown RBP9.08□□□□□ -0.96
CALD1-223ENST00000496024 MPEG1Q2M385 716 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 ZNF628Q5EBL2 1059 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 NXNQ6DKJ4 435 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 RPUSD3Q6P087 351 aaKnown RBP9.08□□□□□ -0.96
CALD1-223ENST00000496024 OPN5Q6U736 354 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 TMEM107Q6UX40 140 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 ATCAYQ86WG3 371 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 KIRREL3Q8IZU9 778 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 CPSF7Q8N684 471 aaKnown RBP9.08□□□□□ -0.96
CALD1-223ENST00000496024 KRTCAP2Q8N6L1 136 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 BCORP1Q8N888 145 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 FAM98AQ8NCA5 519 aaKnown RBP9.08□□□□□ -0.96
CALD1-223ENST00000496024 FAM13CQ8NE31 585 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 OR7G2Q8NG99 324 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 OR7A2PQ8NGA2 310 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 ZNF675Q8TD23 568 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 FAR1Q8WVX9 515 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 CTHRC1Q96CG8 243 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 SCMH1Q96GD3 660 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 AMDHD1Q96NU7 426 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 NXF5Q9H1B4 397 aaKnown RBP9.08□□□□□ -0.96
CALD1-223ENST00000496024 TSPAN10Q9H1Z9 355 aaPredicted RBP9.08□□□□□ -0.96
CALD1-223ENST00000496024 WDR55Q9H6Y2 383 aaPredicted RBP9.08□□□□□ -0.96
CALD1-223ENST00000496024 MEAF6Q9HAF1 191 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 TIMMDC1Q9NPL8 285 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 AGPAT4Q9NRZ5 378 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 INTS9Q9NV88 658 aaKnown RBP9.08□□□□□ -0.96
CALD1-223ENST00000496024 TAS2R7Q9NYW3 318 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 ZNF639Q9UID6 485 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 VPS4AQ9UN37 437 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 DTX4Q9Y2E6 619 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 BAHCC1Q9P281 2608 aa9.08□□□□□ -0.96
CALD1-223ENST00000496024 A0A0G2JMM0 328 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 A0A1W2PPB8 328 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 A0A1W2PRS3 328 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 KIR3DP1A8MWS1 328 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 TCP11X1B4DZS4 312 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 SDHDO14521 159 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 SCAMP2O15127 329 aaKnown RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 HDAC3O15379 428 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 PEX1O43933 1283 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 WISP1O95388 367 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 LAMP1P11279 417 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 LBPP18428 481 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 GPX3P22352 226 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 GNLYP22749 145 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 EPHA3P29320 983 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 UQCRFS1P47985 274 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 MEOX1P50221 254 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 EMDP50402 254 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 DIO3P55073 304 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 MANFP55145 182 aaKnown RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 NME5P56597 212 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 NRG3P56975 720 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 ZNF155Q12901 538 aaPredicted RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 MAD2L1Q13257 205 aaPredicted RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 CEBPEQ15744 281 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 PGS1Q32NB8 556 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 CPTPQ5TA50 214 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 RTL4Q6ZR62 310 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 FAM47EQ6ZV65 393 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 SZRD1Q7Z422 152 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 R3HCC1LQ7Z5L2 792 aaKnown RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 WDR53Q7Z5U6 358 aaPredicted RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 SULF2Q8IWU5 870 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 GPALPP1Q8IXQ4 340 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 TAGAPQ8N103 731 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 ZNF441Q8N8Z8 693 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 PSD4Q8NDX1 1056 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 ZFP28Q8NHY6 868 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 ADIPOR1Q96A54 375 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 SPACA9Q96E40 222 aaPredicted RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 MARK4Q96L34 752 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 TRIM45Q9H8W5 580 aaPredicted RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 SLCO1B3Q9NPD5 702 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 OLAHQ9NV23 265 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 DDX18Q9NVP1 670 aaKnown RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 NOP53Q9NZM5 478 aaKnown RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 PRODH2Q9UF12 536 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 CFL2Q9Y281 166 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 KLF13Q9Y2Y9 288 aaPredicted RBP9.07□□□□□ -0.96
CALD1-223ENST00000496024 GTF3C1Q12789 2109 aa9.07□□□□□ -0.96
CALD1-223ENST00000496024 DNAJC13O75165 2243 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms