RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 YOD1Q5VVQ6 348 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-214ENST00000495485 FAM92BQ6ZTR7 304 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF761Q86XN6 746 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-214ENST00000495485 GPR135Q8IZ08 494 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 MMP21Q8N119 569 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 AMER3Q8N944 861 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 NUP43Q8NFH3 380 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 OR4D9Q8NGE8 314 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 SPPL2AQ8TCT8 520 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 MAGEE2Q8TD90 523 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-214ENST00000495485 XAGE5Q8WWM1 108 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 NR4A3Q92570 626 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 PMM1Q92871 262 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 GATA6Q92908 595 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 ELP4Q96EB1 424 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 CNRIP1Q96F85 164 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-214ENST00000495485 LIN37Q96GY3 246 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-214ENST00000495485 TGM7Q96PF1 710 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 ACTRT3Q9BYD9 372 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 OR51I1Q9H343 314 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 DDX18Q9NVP1 670 aaKnown RBP9.64□□□□□ -0.87
HDAC3-214ENST00000495485 GPATCH2Q9NW75 528 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 USE1Q9NZ43 259 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 C5AR2Q9P296 337 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 ENOPH1Q9UHY7 261 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 SERTAD3Q9UJW9 196 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 ACSL6Q9UKU0 697 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 CDC14AQ9UNH5 594 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 ERVK-11Q9UQG0 969 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 NAALAD2Q9Y3Q0 740 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 FREM2Q5SZK8 3169 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 AKAP13Q12802 2813 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 MN1Q10571 1320 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-214ENST00000495485 A0A087WV62 115 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 HYKKA2RU49 373 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 H0YIG0 161 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 SOCS2O14508 198 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 EI24O14681 340 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 NSA2O95478 260 aaKnown RBP9.63□□□□□ -0.87
HDAC3-214ENST00000495485 MT-CO3P00414 261 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 AK1P00568 194 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 IFNW1P05000 195 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 BCHEP06276 602 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 NUDT7P0C024 238 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 ANKRD34CP0C6C1 535 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 THRBP10828 461 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 CPMP14384 443 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 ETS2P15036 469 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 CAPGP40121 348 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 LSSP48449 732 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 TPD52P55327 224 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-214ENST00000495485 ITGA1P56199 1179 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 INSM1Q01101 510 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-214ENST00000495485 BLMHQ13867 455 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 PRSS53Q2L4Q9 553 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 PRTGQ2VWP7 1150 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 OTUD3Q5T2D3 398 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-214ENST00000495485 TNFAIP8L2Q6P589 184 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-214ENST00000495485 TMEM71Q6P5X7 295 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 TMEM154Q6P9G4 183 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 SHQ1Q6PI26 577 aaKnown RBP9.63□□□□□ -0.87
HDAC3-214ENST00000495485 IGF2-ASQ6U949 168 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF595Q8IYB9 648 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 LGI4Q8N135 537 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 CA13Q8N1Q1 262 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 C10orf111Q8N326 155 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 HORMAD2Q8N7B1 307 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 ADAMTS15Q8TE58 950 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 MAL2Q969L2 176 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 COL26A1Q96A83 441 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 MVB12AQ96EY5 273 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 CNBD2Q96M20 576 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF681Q96N22 645 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF578Q96N58 590 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-214ENST00000495485 MS4A4EQ96PG1 132 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 EPYCQ99645 322 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 SLC29A1Q99808 456 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 YTHDF1Q9BYJ9 559 aaKnown RBP9.63□□□□□ -0.87
HDAC3-214ENST00000495485 ANKRD60Q9BZ19 345 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 NRSN2Q9GZP1 204 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 EVA1AQ9H8M9 152 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 SLAMF7Q9NQ25 335 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 THSD1Q9NS62 852 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 PNPLA3Q9NST1 481 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 NTMQ9P121 344 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 KIF17Q9P2E2 1029 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 SEC14L3Q9UDX4 400 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 SLC13A4Q9UKG4 626 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 MSRB2Q9Y3D2 182 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 URB1O60287 2271 aaKnown RBP9.63□□□□□ -0.87
HDAC3-214ENST00000495485 SCN3AQ9NY46 2000 aa9.63□□□□□ -0.87
HDAC3-214ENST00000495485 TTC36A6NLP5 189 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 C4orf51C9J302 202 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 PDLIM1O00151 329 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 HMGN4O00479 90 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 CASC3O15234 703 aaKnown RBP9.62□□□□□ -0.87
HDAC3-214ENST00000495485 ACOX3O15254 700 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 DYRK3O43781 588 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 COQ9O75208 318 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 UGT2B11O75310 529 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms