RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TMED5Q9Y3A6 229 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 TRAF6Q9Y4K3 522 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.26■□□□□ 0.19
HDAC4-211ENST00000494800 HECTD1Q9ULT8 2610 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 USP9XQ93008 2570 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-211ENST00000494800 FAM166BA8MTA8 275 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 NPIPB8E9PQR5 432 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 ACOX3O15254 700 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 TYROBPO43914 113 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 ZG16O60844 167 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 WISP2O76076 250 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 SLITRK5O94991 958 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 CHRNGP07510 517 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 BPGMP07738 259 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 PCSK2P16519 638 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 S1PR1P21453 382 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 DNASE1L1P49184 302 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 PSPHP78330 225 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 HSF1Q00613 529 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 MGAT2Q10469 447 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 EXOSC7Q15024 291 aaKnown RBP16.25■□□□□ 0.19
HDAC4-211ENST00000494800 LTB4RQ15722 352 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 C3AR1Q16581 482 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 ZNF628Q5EBL2 1059 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 SH2D4BQ5SQS7 431 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 TICAM1Q8IUC6 712 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 NUDCD3Q8IVD9 361 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 FAM109AQ8N4B1 249 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 TWIST2Q8WVJ9 160 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 DIO2Q92813 273 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 HSPBAP1Q96EW2 488 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 LCORQ96JN0 433 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-211ENST00000494800 DOHHQ9BU89 302 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 SH2D2AQ9NP31 389 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 TINAGQ9UJW2 476 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 DNAJC15Q9Y5T4 150 aa16.25■□□□□ 0.19
HDAC4-211ENST00000494800 SETXQ7Z333 2677 aaKnown RBP16.25■□□□□ 0.19
HDAC4-211ENST00000494800 A0A0G2JMM0 328 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 A0A1B0GTH9 108 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 A0A1W2PPB8 328 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 A0A1W2PRS3 328 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 PINLYPA6NC86 204 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 KIR3DP1A8MWS1 328 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 TM9SF1O15321 606 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 GLSO94925 669 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-211ENST00000494800 LINC00032P0C843 101 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 NAGAP17050 411 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 DDX5P17844 614 aaKnown RBP16.24■□□□□ 0.19
HDAC4-211ENST00000494800 PIGAP37287 484 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 NCBP2P52298 156 aaKnown RBP eCLIP16.24■□□□□ 0.19
HDAC4-211ENST00000494800 SMSP52788 366 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 MRPS35P82673 323 aaKnown RBP16.24■□□□□ 0.19
HDAC4-211ENST00000494800 PLCXD2Q0VAA5 305 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 CEBPEQ15744 281 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 HYAL4Q2M3T9 481 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 TRMT12Q53H54 448 aaKnown RBP16.24■□□□□ 0.19
HDAC4-211ENST00000494800 PRAMEF20Q5VT98 475 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 TMEM198Q66K66 360 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 FAM71E1Q6IPT2 247 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 ZCCHC23Q6ZST2 131 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 OR52N2Q8NGI0 321 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 OR9A2Q8NGT5 310 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 CCT7Q99832 543 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 ITPAQ9BY32 194 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 DEFB127Q9H1M4 99 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 ZDHHC11Q9H8X9 412 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 ZFP64Q9NPA5 681 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 TUBA8Q9NY65 449 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-211ENST00000494800 TAS2R9Q9NYW1 312 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 TAS2R7Q9NYW3 318 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 CCL27Q9Y4X3 112 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 ACTL7BQ9Y614 415 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 CHCHD2Q9Y6H1 151 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-211ENST00000494800 POLEQ07864 2286 aa16.24■□□□□ 0.19
HDAC4-211ENST00000494800 DOPEY2Q9Y3R5 2298 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 ANKRD33BA6NCL7 494 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 COQ9O75208 318 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 PDE9AO76083 593 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 SNX4O95219 450 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 CBX7O95931 251 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 TPOP07202 933 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 CREB1P16220 341 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 DRD5P21918 477 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 ABCD3P28288 659 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 MAPK1P28482 360 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 PPICP45877 212 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 FBXW4P57775 412 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 RPL38P63173 70 aaKnown RBP16.23■□□□□ 0.19
HDAC4-211ENST00000494800 DUSP2Q05923 314 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 GALNTL6Q49A17 601 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 LRIG3Q6UXM1 1119 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 PACS2Q86VP3 889 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 TMEM251Q8N6I4 163 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 FAM57AQ8TBR7 257 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 AGR3Q8TD06 166 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 KAT2AQ92830 837 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 PGM2Q96G03 612 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 CCDC120Q96HB5 630 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 ZNF597Q96LX8 424 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 PPP3R2Q96LZ3 170 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms