RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ABCD3P28288 659 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 WNT3P56703 355 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 ETF1P62495 437 aaKnown RBP21.24■□□□□ 0.99
COL27A1-208ENST00000494780 GGTA1PQ4G0N0 100 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 TIGD3Q6B0B8 471 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 METTL4Q8N3J2 472 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 TRPC4APQ8TEL6 797 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 ISL2Q96A47 359 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 RMND5BQ96G75 393 aaPredicted RBP21.24■□□□□ 0.99
COL27A1-208ENST00000494780 UGT2B28Q9BY64 529 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 NXF5Q9H1B4 397 aaKnown RBP21.24■□□□□ 0.99
COL27A1-208ENST00000494780 ZBTB26Q9HCK0 441 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 CAMK2AQ9UQM7 478 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 PCDHA9Q9Y5H5 950 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 NF1P21359 2839 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 C1orf226A1L170 272 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 CD8B2A6NJW9 211 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 SMIM24O75264 130 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 PPM1BO75688 479 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 BMP7P18075 431 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 PTPN6P29350 595 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 MAGEA12P43365 314 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 ZNF136P52737 540 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 MAPK12P53778 367 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 SLC7A5Q01650 507 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 MAP4K2Q12851 820 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 TOMM20Q15388 145 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 KRTAP21-3Q3LHN1 58 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 EIPR1Q53HC9 387 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 SLC48A1Q6P1K1 146 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 TMEM81Q6P7N7 255 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 MILR1Q7Z6M3 343 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 TGIF2LYQ8IUE0 185 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 VWA5B2Q8N398 1253 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 GOT1L1Q8NHS2 421 aaPredicted RBP21.23■□□□□ 0.99
COL27A1-208ENST00000494780 NSUN5Q96P11 429 aaKnown RBP21.23■□□□□ 0.99
COL27A1-208ENST00000494780 LIME1Q9H400 295 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 ELOVL6Q9H5J4 265 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 METTL7AQ9H8H3 244 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 NINJ2Q9NZG7 142 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 FETUBQ9UGM5 382 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 CES1P1Q9UKY3 287 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 AKAP6Q13023 2319 aa21.23■□□□□ 0.99
COL27A1-208ENST00000494780 GOLGA6L10A6NI86 522 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 ATP1B1P05026 303 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 DEKP35659 375 aaKnown RBP21.22■□□□□ 0.99
COL27A1-208ENST00000494780 DAZAP2Q15038 168 aaPredicted RBP21.22■□□□□ 0.99
COL27A1-208ENST00000494780 TSNAXIP1Q2TAA8 658 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 PRICKLE4Q2TBC4 344 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 C8orf74Q6P047 294 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 SYT10Q6XYQ8 523 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 NUP54Q7Z3B4 507 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 COMMD6Q7Z4G1 85 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 OR1J4Q8NGS1 313 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 ABTB1Q969K4 478 aaPredicted RBP21.22■□□□□ 0.99
COL27A1-208ENST00000494780 WDYHV1Q96HA8 205 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 TRIB1Q96RU8 372 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 FUT8Q9BYC5 575 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 BRINP2Q9C0B6 783 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 CALHM2Q9HA72 323 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 XPR1Q9UBH6 696 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 CBLCQ9ULV8 474 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 DTX4Q9Y2E6 619 aa21.22■□□□□ 0.99
COL27A1-208ENST00000494780 PRRC2AP48634 2157 aaKnown RBP21.21■□□□□ 0.99
COL27A1-208ENST00000494780 EXPH5Q8NEV8 1989 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 MBD3L4A6NDZ8 208 aaPredicted RBP21.21■□□□□ 0.99
COL27A1-208ENST00000494780 MBD3L3A6NE82 208 aaPredicted RBP21.21■□□□□ 0.99
COL27A1-208ENST00000494780 MBD3L5A6NJ08 208 aaPredicted RBP21.21■□□□□ 0.99
COL27A1-208ENST00000494780 GNB5O14775 395 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 KRT38O76015 456 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 INHBAP08476 426 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 COL6A2P12110 1019 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 DNASE1P24855 282 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 CTSSP25774 331 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 MGAT2Q10469 447 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 SGO1Q5FBB7 561 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 WIPI1Q5MNZ9 446 aaPredicted RBP21.21■□□□□ 0.99
COL27A1-208ENST00000494780 SLC30A6Q6NXT4 461 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 FAM111BQ6SJ93 734 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 ANGPTL8Q6UXH0 198 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 CDC20BQ86Y33 519 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 KIF18BQ86Y91 864 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 RELL1Q8IUW5 271 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 OR4F6Q8NGB9 312 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 MBD3L2Q8NHZ7 208 aaPredicted RBP21.21■□□□□ 0.99
COL27A1-208ENST00000494780 SLC44A1Q8WWI5 657 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 HGDQ93099 445 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 MAT2BQ9NZL9 334 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 ZNF639Q9UID6 485 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 SLC12A4Q9UP95 1085 aa21.21■□□□□ 0.99
COL27A1-208ENST00000494780 ACOX3O15254 700 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 ACTL6AO96019 429 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 RPS17P08708 135 aaKnown RBP21.2■□□□□ 0.98
COL27A1-208ENST00000494780 RHOXF2BP0C7M4 288 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 CSNK2A2P19784 350 aaPredicted RBP21.2■□□□□ 0.98
COL27A1-208ENST00000494780 TACR1P25103 407 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 OPRM1P35372 400 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 SERPINB9P50453 376 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 CKAP4Q07065 602 aaKnown RBP21.2■□□□□ 0.98
COL27A1-208ENST00000494780 SNTA1Q13424 505 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms