RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 HNMTP50135 292 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 ARFIP1P53367 373 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 GSCP56915 257 aaPredicted RBP5.15□□□□□ -1.58
SMC2-205ENST00000493955 SRYQ05066 204 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 FASTKQ14296 549 aaKnown RBP5.15□□□□□ -1.58
SMC2-205ENST00000493955 TMEM187Q14656 261 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 TMEM30BQ3MIR4 351 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 USH1GQ495M9 461 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 RUSC1-AS1Q66K80 236 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 NIPAL3Q6P499 406 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 LCA5Q86VQ0 697 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 OR2T6Q8NHC8 308 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 C11orf45Q8TAV5 145 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 DUX3Q96PT4 197 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 CPXM1Q96SM3 734 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 RAB33BQ9H082 229 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 RPAP3Q9H6T3 665 aaPredicted RBP5.15□□□□□ -1.58
SMC2-205ENST00000493955 KAT8Q9H7Z6 458 aaKnown RBP5.15□□□□□ -1.58
SMC2-205ENST00000493955 Q9HAA7 133 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 NRN1Q9NPD7 142 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 KLF2Q9Y5W3 355 aaPredicted RBP5.15□□□□□ -1.58
SMC2-205ENST00000493955 A0A0A6YYD4 124 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 CYB561D2O14569 222 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 TFECO14948 347 aaPredicted RBP5.14□□□□□ -1.59
SMC2-205ENST00000493955 ASNSP08243 561 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 SLC35G4P0C7Q5 338 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 PSMA5P28066 241 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 HTR2AP28223 471 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 EXOSC2Q13868 293 aaKnown RBP5.14□□□□□ -1.59
SMC2-205ENST00000493955 TRIP10Q15642 601 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 ANKRD55Q3KP44 614 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 SLC36A3Q495N2 470 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 UNC50Q53HI1 259 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 ZNF311Q5JNZ3 666 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 SLC39A4Q6P5W5 647 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 CARM1Q86X55 608 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 ZFAND4Q86XD8 727 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 CBWD2Q8IUF1 395 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 METTL4Q8N3J2 472 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 OR2T34Q8NGX1 318 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 RCHY1Q96PM5 261 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 LGMNQ99538 433 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMC2-205ENST00000493955 SNX6Q9UNH7 406 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 B9D1Q9UPM9 204 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 GAB2Q9UQC2 676 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 NIP7Q9Y221 180 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMC2-205ENST00000493955 SLC9A8Q9Y2E8 581 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 SYNJ2O15056 1496 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 TRBV5-4A0A0C4DH59 114 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 WASH3PC4AMC7 463 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 H3BMH7 237 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 MPHOSPH10O00566 681 aaKnown RBP5.14□□□□□ -1.59
SMC2-205ENST00000493955 GMFGO60234 142 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 ZSCAN5DPP0CG00 497 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 TSPAN8P19075 237 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 TMEM50BP56557 158 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 NOP14P78316 857 aaKnown RBP5.14□□□□□ -1.59
SMC2-205ENST00000493955 SNTB2Q13425 540 aaKnown RBP5.14□□□□□ -1.59
SMC2-205ENST00000493955 EMC2Q15006 297 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 MOGAT2Q3SYC2 334 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 NADK2Q4G0N4 442 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 DMKNQ6E0U4 476 aaPredicted RBP5.14□□□□□ -1.59
SMC2-205ENST00000493955 WASH2PQ6VEQ5 465 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 LPCAT2Q7L5N7 544 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 GRAMD2AQ8IUY3 354 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 CENPSQ8N2Z9 138 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 ZNF614Q8N883 585 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.14□□□□□ -1.59
SMC2-205ENST00000493955 VSTM2LQ96N03 204 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 APOOQ9BUR5 198 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 RBM4Q9BWF3 364 aaKnown RBP5.14□□□□□ -1.59
SMC2-205ENST00000493955 NT5C3AQ9H0P0 336 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 ALG9Q9H6U8 611 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 NT5DC2Q9H857 520 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 RMND5AQ9H871 391 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 TRPV5Q9NQA5 729 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 DEPPQ9NTK1 212 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 GPR83Q9NYM4 423 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 RDH8Q9NYR8 311 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 WWOXQ9NZC7 414 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 THYN1Q9P016 225 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 RNF115Q9Y4L5 304 aa5.14□□□□□ -1.59
SMC2-205ENST00000493955 PRDM2Q13029 1718 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 SF3B1O75533 1304 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMC2-205ENST00000493955 PARD3Q8TEW0 1356 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 IGLON5A6NGN9 336 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 KRTAP29-1A8MX34 341 aaPredicted RBP5.13□□□□□ -1.59
SMC2-205ENST00000493955 GPR89AB7ZAQ6 455 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 ALOX15BO15296 676 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 DUS4LO95620 317 aaKnown RBP5.13□□□□□ -1.59
SMC2-205ENST00000493955 ECDO95905 644 aaPredicted RBP5.13□□□□□ -1.59
SMC2-205ENST00000493955 GPR89BP0CG08 455 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 CFC1BP0CG36 223 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 CFC1P0CG37 223 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 FOSL2P15408 326 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 DRD5P21918 477 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 RFC2P35250 354 aa5.13□□□□□ -1.59
SMC2-205ENST00000493955 TPD52L1Q16890 204 aaPredicted RBP5.13□□□□□ -1.59
SMC2-205ENST00000493955 DCAF4L1Q3SXM0 396 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms