RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 BCAS1O75363 584 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 SUPT7LO94864 414 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 HPRP00739 348 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 HMGN1P05114 100 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 S100A6P06703 90 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 MATN1P21941 496 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 COL8A1P27658 744 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ERP29P30040 261 aaKnown RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 RPS5P46782 204 aaKnown RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 CLCN7P51798 805 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ARF3P61204 181 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 MVKQ03426 396 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 SRSF11Q05519 484 aaKnown RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 SCRN3Q0VDG4 424 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 COX10Q12887 443 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 CTBP1Q13363 440 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 NR6A1Q15406 480 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 TSC22D1Q15714 1073 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 HKDC1Q2TB90 917 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 PRTGQ2VWP7 1150 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 YIF1BQ5BJH7 314 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ATAD3CQ5T2N8 411 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 TTC23Q5W5X9 447 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 KIAA0930Q6ICG6 404 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 FAM45BPQ6NSW5 357 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 CYHR1Q6ZMK1 362 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 RNF44Q7L0R7 432 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 RETREG3Q86VR2 466 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ATCAYQ86WG3 371 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 PAQR7Q86WK9 346 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 CILP2Q8IUL8 1156 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 LYSMD2Q8IV50 215 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 LIX1LQ8IVB5 337 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 LRRC56Q8IYG6 542 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ARHGEF39Q8N4T4 335 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 POC5Q8NA72 575 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 MCUQ8NE86 351 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 OR6F1Q8NGZ6 308 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 HMGCLL1Q8TB92 370 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 LRRC20Q8TCA0 184 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 FAM45AQ8TCE6 357 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 SKA2Q8WVK7 121 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 CYGBQ8WWM9 190 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 FIG4Q92562 907 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 PIK3R3Q92569 461 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 MUL1Q969V5 352 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 RAD51AP1Q96B01 352 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF669Q96BR6 464 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 PTERQ96BW5 349 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 C8orf44Q96CB5 159 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 RCN3Q96D15 328 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 GIMAP5Q96F15 307 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 SIGLEC10Q96LC7 697 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 DPH7Q9BTV6 452 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 CENPOQ9BU64 300 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ILKAPQ9H0C8 392 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 C12orf65Q9H3J6 166 aaKnown RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF385DQ9H6B1 395 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ZBTB26Q9HCK0 441 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 SPAG4Q9NPE6 437 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ZC4H2Q9NQZ6 224 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ENAMQ9NRM1 1142 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 INTS10Q9NVR2 710 aaKnown RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 CUEDC1Q9NWM3 386 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 B3GNT2Q9NY97 397 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ADA2Q9NZK5 511 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 SLC17A6Q9P2U8 582 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 WARS2Q9UGM6 360 aaKnown RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 ZC3H7BQ9UGR2 993 aaKnown RBP7.69□□□□□ -1.18
HDAC6-234ENST00000493923 BAG5Q9UL15 447 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 SRPK3Q9UPE1 567 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 SH2B3Q9UQQ2 575 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 RAP2CQ9Y3L5 183 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 KLK4Q9Y5K2 254 aa7.69□□□□□ -1.18
HDAC6-234ENST00000493923 A1L4Q6 167 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 HYKKA2RU49 373 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 HMX3A6NHT5 357 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 BBIP1A8MTZ0 92 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 FOXS1O43638 330 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 ZBTB14O43829 449 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 VPS4BO75351 444 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 PSIP1O75475 530 aaKnown RBP7.68□□□□□ -1.18
HDAC6-234ENST00000493923 KLHL18O94889 574 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 SLITRK5O94991 958 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 RPS17P08708 135 aaKnown RBP7.68□□□□□ -1.18
HDAC6-234ENST00000493923 BMP4P12644 408 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 IL7P13232 177 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 PKMP14618 531 aaKnown RBP7.68□□□□□ -1.18
HDAC6-234ENST00000493923 MMP11P24347 488 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 ITGA3P26006 1051 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 SERPINB5P36952 375 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 SLC1A2P43004 574 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 MAGEA3P43357 314 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 PLA2G16P53816 162 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 RRADP55042 308 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 SOX8P57073 446 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 MS4A2Q01362 244 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 PRKCDQ05655 676 aa7.68□□□□□ -1.18
HDAC6-234ENST00000493923 TSTA3Q13630 321 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-234ENST00000493923 SYT16Q17RD7 645 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms